Banerjee A[Author] AND Faridabad

Dr Arup Banerjee RCB Faridabad research publications

https://rcb.res.in/hi/node/231

Banerjee A[Author] AND (dengue OR "Japanese encephalitis" OR neutrophil OR "extracellular vesicles")

ls -la /tmp/workspace/ 2>/dev/null || mkdir -p /tmp/workspace && echo "created"

mkdir -p /tmp/workspace/banerjee-rcb && python3 << 'EOF' from reportlab.lib.pagesizes import A4 from reportlab.lib import colors from reportlab.lib.styles import getSampleStyleSheet, ParagraphStyle from reportlab.lib.units import cm, mm from reportlab.platypus import (SimpleDocTemplate, Paragraph, Spacer, Table, TableStyle, HRFlowable, KeepTogether) from reportlab.lib.enums import TA_CENTER, TA_LEFT, TA_JUSTIFY OUTPUT = "/tmp/workspace/banerjee-rcb/Dr_Arup_Banerjee_Publications_Summary.pdf" doc = SimpleDocTemplate( OUTPUT, pagesize=A4, rightMargin=2*cm, leftMargin=2*cm, topMargin=2*cm, bottomMargin=2*cm, title="Dr. Arup Banerjee - Publications Summary", author="Orris AI" ) styles = getSampleStyleSheet() # Custom styles NAVY = colors.HexColor("#1A3A5C") TEAL = colors.HexColor("#1D7874") GOLD = colors.HexColor("#D4A017") LGRAY = colors.HexColor("#F4F6F8") DGRAY = colors.HexColor("#555555") title_style = ParagraphStyle("TitleStyle", parent=styles["Title"], fontName="Helvetica-Bold", fontSize=20, textColor=NAVY, alignment=TA_CENTER, spaceAfter=4) subtitle_style = ParagraphStyle("SubTitle", parent=styles["Normal"], fontName="Helvetica", fontSize=11, textColor=DGRAY, alignment=TA_CENTER, spaceAfter=2) section_style = ParagraphStyle("Section", parent=styles["Heading1"], fontName="Helvetica-Bold", fontSize=13, textColor=TEAL, spaceBefore=14, spaceAfter=6, borderPad=2) body_style = ParagraphStyle("Body", parent=styles["Normal"], fontName="Helvetica", fontSize=9.5, textColor=colors.black, leading=14, spaceAfter=5, alignment=TA_JUSTIFY) bullet_style = ParagraphStyle("Bullet", parent=styles["Normal"], fontName="Helvetica", fontSize=9.5, textColor=colors.black, leading=14, leftIndent=14, spaceAfter=3, bulletIndent=4, bulletFontName="Helvetica", bulletFontSize=9.5) caption_style = ParagraphStyle("Caption", parent=styles["Normal"], fontName="Helvetica-Oblique", fontSize=8.5, textColor=DGRAY, alignment=TA_CENTER, spaceAfter=4) label_style = ParagraphStyle("Label", parent=styles["Normal"], fontName="Helvetica-Bold", fontSize=9, textColor=NAVY) val_style = ParagraphStyle("Val", parent=styles["Normal"], fontName="Helvetica", fontSize=9, textColor=colors.black, leading=13) def section_header(text): return [ Paragraph(text, section_style), HRFlowable(width="100%", thickness=1.5, color=TEAL, spaceAfter=6), ] def pub_table(rows): """rows = list of (pmid, authors, title, journal, year, pub_type)""" table_data = [ [Paragraph("<b>PMID</b>", label_style), Paragraph("<b>Authors</b>", label_style), Paragraph("<b>Title</b>", label_style), Paragraph("<b>Journal</b>", label_style), Paragraph("<b>Year</b>", label_style), Paragraph("<b>Type</b>", label_style)] ] for pmid, authors, title, journal, year, ptype in rows: pmid_link = f'<link href="https://pubmed.ncbi.nlm.nih.gov/{pmid}" color="#1D7874">{pmid}</link>' table_data.append([ Paragraph(pmid_link, val_style), Paragraph(authors, val_style), Paragraph(title, val_style), Paragraph(f"<i>{journal}</i>", val_style), Paragraph(year, val_style), Paragraph(ptype, val_style), ]) t = Table(table_data, colWidths=[1.2*cm, 2.6*cm, 6.6*cm, 3.0*cm, 1.1*cm, 1.6*cm]) t.setStyle(TableStyle([ ("BACKGROUND", (0,0), (-1,0), NAVY), ("TEXTCOLOR", (0,0), (-1,0), colors.white), ("FONTNAME", (0,0), (-1,0), "Helvetica-Bold"), ("FONTSIZE", (0,0), (-1,0), 9), ("ALIGN", (0,0), (-1,-1), "LEFT"), ("VALIGN", (0,0), (-1,-1), "TOP"), ("ROWBACKGROUNDS", (0,1), (-1,-1), [LGRAY, colors.white]), ("GRID", (0,0), (-1,-1), 0.4, colors.HexColor("#CCCCCC")), ("TOPPADDING", (0,0), (-1,-1), 4), ("BOTTOMPADDING", (0,0), (-1,-1), 4), ("LEFTPADDING", (0,0), (-1,-1), 4), ("RIGHTPADDING", (0,0), (-1,-1), 4), ])) return t # ─── CONTENT ───────────────────────────────────────────────────────────────── story = [] # ── Header banner ── header_data = [[ Paragraph("DR. ARUP BANERJEE", title_style), Paragraph("Professor | Regional Centre for Biotechnology (RCB), Faridabad", subtitle_style), Paragraph("NCR Biotech Science Cluster · Faridabad-Gurgaon Expressway · Faridabad 121001, Haryana, India", subtitle_style), Paragraph("arup@rcb.res.in | +91-129-2848852 | rcb.res.in/faculty/dr-arup-banerjee", subtitle_style), ]] header_t = Table([[Paragraph( "<b>DR. ARUP BANERJEE</b><br/>" "<font size=11 color='#555555'>Professor, Regional Centre for Biotechnology (RCB), Faridabad</font><br/>" "<font size=9.5 color='#555555'>NCR Biotech Science Cluster · Faridabad-Gurgaon Expressway · Faridabad 121001, Haryana</font><br/>" "<font size=9.5 color='#1D7874'>arup@rcb.res.in | +91-129-2848852 | Joined RCB: August 2018</font>", ParagraphStyle("HT", fontName="Helvetica-Bold", fontSize=18, textColor=colors.white, alignment=TA_CENTER, leading=26) )]], colWidths=["100%"]) header_t.setStyle(TableStyle([ ("BACKGROUND", (0,0), (-1,-1), NAVY), ("TOPPADDING", (0,0), (-1,-1), 16), ("BOTTOMPADDING", (0,0), (-1,-1), 16), ("LEFTPADDING", (0,0), (-1,-1), 20), ("RIGHTPADDING", (0,0), (-1,-1), 20), ("ROUNDEDCORNERS", [6]), ])) story.append(header_t) story.append(Spacer(1, 10)) # ── Metrics bar ── metrics = [ ["~112\nPublications", "22,000+\nTotal Reads", "Dengue &\nJEV Expert", "Extracellular\nVesicles", "Since 2018\nat RCB"], ] metrics_t = Table(metrics, colWidths=[3.3*cm]*5) metrics_t.setStyle(TableStyle([ ("BACKGROUND", (0,0), (-1,-1), TEAL), ("TEXTCOLOR", (0,0), (-1,-1), colors.white), ("FONTNAME", (0,0), (-1,-1), "Helvetica-Bold"), ("FONTSIZE", (0,0), (-1,-1), 9), ("ALIGN", (0,0), (-1,-1), "CENTER"), ("VALIGN", (0,0), (-1,-1), "MIDDLE"), ("TOPPADDING", (0,0), (-1,-1), 8), ("BOTTOMPADDING", (0,0), (-1,-1), 8), ("GRID", (0,0), (-1,-1), 0.5, colors.white), ])) story.append(metrics_t) story.append(Spacer(1, 12)) # ── Research Focus ── story += section_header("Research Focus") story.append(Paragraph( "Dr. Banerjee's laboratory focuses on the immunopathogenesis of vector-borne viral diseases, " "primarily <b>Dengue virus (DENV)</b> and <b>Japanese Encephalitis Virus (JEV)</b>. The lab studies " "myeloid cell (particularly neutrophil) responses to viral infection, phenotypic plasticity, " "and how altered cell fates drive disease severity. A parallel theme is the biology and therapeutic " "potential of <b>extracellular vesicles (EVs)</b> in viral pathogenesis and intervention.", body_style)) story.append(Spacer(1, 4)) focus_items = [ ("Neutrophil Biology", "Phenotypic heterogeneity, biogenesis, and function of neutrophils in acute viral infection; how viral pathogens reshape neutrophil identity and fate (J Leukocyte Biology, 2023a, b)."), ("Dengue Immunopathology", "Host transcriptomics, myeloid cell roles, thymic atrophy, and T cell suppression via PD-L1/PD-1 axis in severe dengue."), ("Japanese Encephalitis", "Proteomics of JEV-infected cells, neuroprotective antivirals (methotrimeprazine), and molecular mechanisms of neuroinvasion."), ("Extracellular Vesicles", "EVs as carriers of immune signals during infection; engineering EVs targeting NLRP3 inflammasome for neuroinflammation therapy."), ("Antiviral Drug Discovery", "Small animal models, 3D organoid models, and cell-based assays for identifying immune modulators and antivirals against arboviruses."), ] fd = [[Paragraph(f"<b>{k}</b>", val_style), Paragraph(v, val_style)] for k,v in focus_items] ft = Table(fd, colWidths=[4*cm, 12.2*cm]) ft.setStyle(TableStyle([ ("ROWBACKGROUNDS", (0,0), (-1,-1), [LGRAY, colors.white]), ("VALIGN", (0,0), (-1,-1), "TOP"), ("TOPPADDING", (0,0), (-1,-1), 5), ("BOTTOMPADDING", (0,0), (-1,-1), 5), ("LEFTPADDING", (0,0), (-1,-1), 6), ("RIGHTPADDING", (0,0), (-1,-1), 6), ("GRID", (0,0), (-1,-1), 0.3, colors.HexColor("#DDDDDD")), ("BACKGROUND", (0,0), (0,-1), colors.HexColor("#E8F0F7")), ])) story.append(ft) story.append(Spacer(1, 12)) # ── Review Articles ── story += section_header("Review Articles") story.append(Paragraph( "The following peer-reviewed review articles represent Dr. Banerjee's contributions to synthesising " "knowledge in virology, immunology, and extracellular vesicle research:", body_style)) story.append(Spacer(1, 5)) review_rows = [ ("41416803", "Kumari S, Banerjee A", "Extracellular vesicles: the double-edged sword in viral infections", "mBio", "2026", "Review"), ("34284874", "Rawat S, Vrati S, Banerjee A", "Neutrophils at the crossroads of acute viral infections and severity", "Mol Aspects Med", "2021", "Review"), ("34696397", "Nanaware N, Banerjee A, et al.", "Dengue Virus Infection: A Tale of Viral Exploitations and Host Responses", "Viruses", "2021", "Review"), ("31781366", "Banerjee A, Tripathi A", "Recent advances in understanding Japanese encephalitis", "F1000Research", "2019", "Review"), ("33471558", "Banerjee A, Jain SM, et al.", "Sources, isolation strategies and therapeutic outcome of exosomes at a glance", "Regen Med", "2020", "Review"), ("38992790", "Das D, Jothimani G, Banerjee A", "Brief review on advances in diagnostic and therapeutic applications of EVs in cardiovascular disease", "Int J Biochem Cell Biol", "2024", "Review"), ("38255322", "Adhikary S, Pathak S, ... Banerjee A", "Current Technologies and Future Perspectives in Immunotherapy towards Clinical Oncology", "Biomedicines", "2024", "Review"), ] story.append(pub_table(review_rows)) story.append(Spacer(1, 12)) # ── Original Research Articles ── story += section_header("Original Research Articles") story.append(Paragraph( "Selected original research articles from Dr. Banerjee's group at RCB and collaborative work:", body_style)) story.append(Spacer(1, 5)) research_rows = [ ("41353446", "Kusuma B, Rawat S, ... Banerjee A", "Depletion of myeloid cells in AG129 mice reduces oxidative stress and dengue-induced thymic atrophy", "Cell Commun Signal", "2025", "Research"), ("39211544", "Parveen S, Bhat CV, ... Banerjee A", "Bacterial pore-forming toxin pneumolysin drives pathogenicity through host extracellular vesicles", "iScience", "2024", "Research"), ("38177535", "Prajapat SK, Mishra L, ... Banerjee A", "Methotrimeprazine is a neuroprotective antiviral in JEV infection via adaptive ER stress and autophagy", "EMBO Mol Med", "2024", "Research"), ("37982662", "Kumari S, Bandyopadhyay B, ... Banerjee A", "EVs from severe dengue patients induce CD4+ T cell suppression through PD-L1/PD-1 interaction", "mBio", "2023", "Research"), ("36748518", "Saini J, Thapa U, ... Banerjee A", "Knockdown of NEAT1 restricts dengue virus replication by augmenting IFN-a-inducible protein 27 via RIG-I pathway", "J Gen Virol", "2023", "Research"), ("36445062", "Barnwal A, Basu B, ... Banerjee A", "SARS-CoV-2 Spike Protein-Activated Dendritic Cell-Derived EVs Induce Antiviral Immunity in Mice", "ACS Biomater Sci Eng", "2022", "Research"), ("35219218", "Sarkar L, Oko L, ... Banerjee A", "Azadirachta indica bark extract and Nimbin isomers restrict beta-coronaviral infection and replication", "Virology", "2022", "Research"), ("34546869", "Sharma KB, Chhabra S, ... Banerjee A", "Proteomic landscape of Japanese encephalitis virus-infected fibroblasts", "J Gen Virol", "2021", "Research"), ("28683259", "Banerjee A, Shukla S, Pandey AD, et al.", "RNA-Seq of PBMCs reveals transcriptional signatures in disease progression in dengue patients", "Transl Res", "2017", "Research"), ] story.append(pub_table(research_rows)) story.append(Spacer(1, 12)) # ── Pre-RCB Highlights ── story += section_header("Notable Pre-RCB Publications (Hepatitis Virology)") story.append(Paragraph( "Before joining RCB (2018), Dr. Banerjee published extensively on hepatitis B and C virus biology. " "Some of his most-cited work from this period:", body_style)) story.append(Spacer(1, 5)) pre_rows = [ ("—", "Mazumdar B, Banerjee A, et al.", "Hepatitis C virus E1 envelope glycoprotein interacts with apolipoproteins in facilitating entry into hepatocytes (~97 citations)", "Hepatology", "2011", "Research"), ("—", "Banerjee A, et al.", "Hepatitis C virus differentially modulates forkhead transcription factors and insulin-induced metabolic gene expression (~78 citations)", "J Virology", "2010", "Research"), ("—", "Datta S, Panigrahi R, ... Banerjee A", "Genetic characterization of HBV in peripheral blood leukocytes: evidence for selection and compartmentalization (~52 citations)", "J Virology", "2009", "Research"), ("—", "Banerjee A, et al.", "Frequency and significance of HBV surface gene variants in anti-HBc only individuals in Eastern India (~62 citations)", "J Clin Virology", "2007", "Research"), ("—", "Panigrahi R, ... Banerjee A", "Anti-HBc testing and detection of occult HBV by in-house NAT among blood donors in Berhampur", "Virology J", "2010", "Research"), ] story.append(pub_table(pre_rows)) story.append(Spacer(1, 12)) # ── Current / Funded Project ── story += section_header("Current Funded Research Project (2025-2026)") proj_data = [ ["Project Title:", "Assessing the efficacy of engineered extracellular vesicles targeting NLRP3 inflammasome in the neuroinflammatory disease model"], ["Role:", "Principal Investigator (PI)"], ["Institution:", "Regional Centre for Biotechnology (RCB), Faridabad"], ["Significance:", "This project bridges EV engineering and neuroinflammation biology, aiming to develop next-generation biologics for neurological diseases by targeting the NLRP3 inflammasome pathway."], ] proj_t = Table( [[Paragraph(k, label_style), Paragraph(v, val_style)] for k,v in proj_data], colWidths=[3.2*cm, 13.0*cm] ) proj_t.setStyle(TableStyle([ ("BACKGROUND", (0,0), (0,-1), colors.HexColor("#E8F0F7")), ("BACKGROUND", (1,0), (1,-1), LGRAY), ("VALIGN", (0,0), (-1,-1), "TOP"), ("TOPPADDING", (0,0), (-1,-1), 6), ("BOTTOMPADDING", (0,0), (-1,-1), 6), ("LEFTPADDING", (0,0), (-1,-1), 6), ("RIGHTPADDING", (0,0), (-1,-1), 6), ("GRID", (0,0), (-1,-1), 0.3, colors.HexColor("#CCCCCC")), ])) story.append(proj_t) story.append(Spacer(1, 12)) # ── Contact ── story += section_header("Contact & Resources") contact_data = [ ["Email:", "arup@rcb.res.in"], ["Phone:", "+91-129-2848852"], ["Lab page:", "http://rcb.res.in/faculty/dr-arup-banerjee"], ["Google Scholar:", "https://scholar.google.com/citations?user=mhMPonUAAAAJ&hl=en"], ["ResearchGate:", "https://www.researchgate.net/profile/Arup-Banerjee-2"], ["Address:", "Regional Centre for Biotechnology, NCR Biotech Science Cluster, 3rd Milestone, Faridabad-Gurgaon Expressway, P.O. Box 3, Faridabad - 121 001, Haryana (NCR Delhi), India"], ] ct = Table([[Paragraph(k, label_style), Paragraph(v, val_style)] for k,v in contact_data], colWidths=[3.2*cm, 13.0*cm]) ct.setStyle(TableStyle([ ("BACKGROUND", (0,0), (0,-1), colors.HexColor("#E8F0F7")), ("ROWBACKGROUNDS",(1,0), (1,-1), [LGRAY, colors.white]), ("VALIGN", (0,0), (-1,-1), "TOP"), ("TOPPADDING", (0,0), (-1,-1), 5), ("BOTTOMPADDING", (0,0), (-1,-1), 5), ("LEFTPADDING", (0,0), (-1,-1), 6), ("RIGHTPADDING", (0,0), (-1,-1), 6), ("GRID", (0,0), (-1,-1), 0.3, colors.HexColor("#CCCCCC")), ])) story.append(ct) story.append(Spacer(1, 14)) # ── Footer note ── story.append(HRFlowable(width="100%", thickness=0.5, color=DGRAY)) story.append(Spacer(1, 4)) story.append(Paragraph( "This summary was compiled on 28 July 2026 using PubMed, Google Scholar, and the official RCB faculty page. " "PMIDs link directly to PubMed abstracts. For a complete and up-to-date list of publications, visit " "Dr. Banerjee's Google Scholar or ResearchGate profile. Total publications: ~112 (as of mid-2026).", caption_style)) doc.build(story) print("PDF created:", OUTPUT) EOF