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Thyroid Function Tests (TFT) - Complete Explanation
1. The Hypothalamic-Pituitary-Thyroid (HPT) Axis - The Foundation
Before understanding each test, you must understand the control system:
Hypothalamus → TRH (Thyrotropin-Releasing Hormone)
↓
Anterior Pituitary → TSH (Thyroid-Stimulating Hormone)
↓
Thyroid Gland → T4 (Thyroxine) + T3 (Triiodothyronine)
↓
Negative Feedback back to Hypothalamus & Pituitary
The thyroid gland secretes T4 (~93%) and T3 (~7%) in response to TSH stimulation. T4 is largely a prohormone; most active T3 is produced by peripheral conversion of T4 via deiodinase enzymes in liver, kidney, and other tissues.
2. TSH (Thyroid-Stimulating Hormone)
What it is
- A glycoprotein secreted by the anterior pituitary
- Has alpha and beta subunits - the beta subunit carries specificity for the TSH receptor
- Normal range: 0.35 - 5.0 mIU/L (most labs); some use 0.5-5 μU/mL
Why it is the first-line test
TSH has an inverse log-linear relationship with free T4:
- A small change in free T4 causes a large, amplified change in TSH
- This makes TSH the most sensitive and specific single test for thyroid dysfunction
- A normal TSH virtually excludes primary thyroid disease in a stable, otherwise healthy patient
Assay evolution (generations)
| Generation | Sensitivity | Distinguishes |
|---|
| 1st (RIA, 1965) | ~1 mIU/L | Could not detect suppressed values |
| 2nd (immunometric) | 0.1-0.2 mIU/L | Better but still limited |
| 3rd (current gold standard) | ~0.005 mIU/L | Distinguishes frank suppression from mild suppression |
| 4th | 0.0004 mIU/L | Available but no added clinical utility |
The 3rd-generation ultrasensitive TSH assay is now the standard. It can distinguish:
- Frank Graves hyperthyroidism: TSH <0.01 mIU/L
- Subclinical hyperthyroidism: TSH 0.01-0.1 mIU/L
Key limitations of TSH alone
- Secondary (pituitary) hypothyroidism: TSH is low/normal despite low T4 - TSH is inappropriate here
- Tertiary (hypothalamic) hypothyroidism: same problem
- Non-thyroidal illness (NTI/sick euthyroid): TSH suppressed during acute illness, rebounds above normal in recovery
- Medications: glucocorticoids, dopamine, opioids all suppress TSH
- Biotin interference: supplements >1000 mcg cause falsely LOW TSH (stop biotin 2 days before testing)
- Recent thyroid therapy: TSH remains suppressed for months after treating hyperthyroidism
Source: Harrison's Principles of Internal Medicine 22E; Henry's Clinical Diagnosis and Management by Laboratory Methods
3. Understanding Bound vs Free Hormones - The Critical Concept
This is the heart of understanding why Total T4/T3 differ from Free T4/T3.
Thyroid Hormone Binding Proteins
In circulation, thyroid hormones are heavily protein-bound:
| Binding Protein | Binds | Comments |
|---|
| TBG (Thyroxine-Binding Globulin) | ~70-75% of T4, ~80% of T3 | Main carrier |
| Transthyretin (TBPA) | ~10-15% of T4 | Also called prealbumin |
| Albumin | ~10-15% | Lower affinity but high capacity |
Only a tiny fraction (~0.02-0.03% of total T4; ~0.3% of total T3) circulates as free (unbound) hormone. This free fraction is the biologically active component that:
- Enters target cells
- Binds nuclear thyroid hormone receptors
- Exerts metabolic effects
- Provides negative feedback to the pituitary
"Only a small fraction of the hormones are free and unbound. Laboratory measurement of total T3 and total T4 measures mainly protein-bound hormone concentrations." - Tintinalli's Emergency Medicine
4. Total T4 (Serum Thyroxine)
What it measures
- Both free + protein-bound T4 combined (predominantly bound)
- Measured by radioimmunoassay (RIA)
- Normal range: 55-150 nmol/L (or ~4.5-12 μg/dL)
What it reflects
- Primarily reflects thyroid gland output (T4 secretion)
- Since T4 is ~99.97% protein-bound, total T4 fluctuates with changes in binding protein levels, not just thyroid function
Factors that raise Total T4 (without true hyperthyroidism)
- Pregnancy (elevated estrogen raises TBG)
- Oral contraceptives / estrogen therapy
- Tamoxifen, SERMs
- Inflammatory liver disease
- Hereditary TBG excess
- Hyperemesis gravidarum (hCG cross-stimulates thyroid)
Factors that lower Total T4 (without true hypothyroidism)
- Anabolic steroids / androgens (reduce TBG)
- Nephrotic syndrome (protein loss)
- Malnutrition
- Drugs: phenytoin, carbamazepine, salicylates, NSAIDs (displace T4 from protein binding)
Key point: In all these conditions, Free T4 is normal and the patient is euthyroid - total T4 is misleading.
Source: Schwartz's Principles of Surgery 11E; Harrison's Principles of Internal Medicine 22E
5. Total T3 (Serum Triiodothyronine)
What it measures
- Free + bound T3 combined
- Normal range: 1.5-3.5 nmol/L (or ~80-220 ng/dL)
Why it differs from Total T4
- T3 is the biologically active form (3-4x more potent than T4)
- 80% of circulating T3 comes from peripheral deiodination of T4, not direct thyroid secretion
- Therefore T3 levels reflect peripheral thyroid hormone metabolism more than gland output
- Total T3 is not suitable as a general screening test for this reason
When Total T3 is specifically useful
- T3 thyrotoxicosis: ~2-5% of hyperthyroid patients have isolated elevated T3 with normal T4 - classic in early Graves' disease or toxic nodule
- Early hyperthyroidism: T3 rises before T4
- TSH-secreting tumors: both T3 and T4 elevated with non-suppressed TSH
An important counterintuitive fact
In early hypothyroidism, Total T3 is often normal or even elevated - because as the gland fails, it preferentially secretes T3, and peripheral conversion is upregulated to maintain T3 levels. This makes T3 a poor early marker of hypothyroidism.
6. Free T4 (FT4)
What it measures
- Only the unbound, biologically active T4 fraction
- Normal range: 12-28 pmol/L (or ~0.7-1.9 ng/dL)
- Measured by: direct immunoassay (equilibrium dialysis is gold standard), or calculated via Free T4 Index
Why it is better than Total T4
- NOT affected by changes in binding protein levels
- Directly reflects the hormone available to tissues and the pituitary
- Correlates directly with the pituitary's "perception" of thyroid status
Clinical use of Free T4
- Confirms hyperthyroidism when TSH is suppressed
- Confirms hypothyroidism when TSH is elevated
- Essential in pituitary/hypothalamic disease (where TSH is unreliable)
- Detects early hyperthyroidism: FT4 rises before Total T4
- End-organ resistance (Refetoff's syndrome): T4 elevated but TSH normal - FT4 helps clarify
Free T4 Index (FT4I) - indirect method
"An indirect method that is now less commonly used to estimate unbound thyroid hormone levels is to calculate the free T3 or free T4 index from the total T4 or T3 concentration and the thyroid hormone binding ratio (THBR)." - Harrison's 22E
The THBR comes from the T3-resin uptake test - if free T4 is high, fewer binding sites are available for labeled T3, more T3 binds the resin, so resin uptake increases. FT4I = Total T4 × THBR. This corrects for protein-binding abnormalities.
7. Free T3 (FT3)
What it measures
- Unbound, active T3 fraction
- Normal range: 3-9 pmol/L (or ~2.3-4.2 pg/mL)
When it is specifically used
- Most useful in confirming early hyperthyroidism: FT3 and FT4 rise before total T4 and total T3
- T3 toxicosis: suppressed TSH + normal FT4 → check FT3 (will be elevated)
- Monitoring Graves' disease treatment
- Not useful in hypothyroidism (stays normal until late)
"For most purposes, the unbound T4 level is sufficient to confirm thyrotoxicosis, but 2-5% of patients have only an elevated T3 level (T3 toxicosis). Thus, unbound T3 levels should be measured in patients with a suppressed TSH but normal unbound T4 levels." - Harrison's Principles of Internal Medicine 22E
8. The Relationship Between Total and Free Hormones - Summary
Total T4/T3 = Bound (inactive) fraction + Free (active) fraction
(~99.97% / ~99.7%) (~0.03% / ~0.3%)
| Scenario | TBG | Total T4 | Free T4 | TSH | Clinical Status |
|---|
| Pregnancy / OCP | ↑ | ↑ | Normal | Normal | Euthyroid |
| Nephrotic syndrome | ↓ | ↓ | Normal | Normal | Euthyroid |
| Hyperthyroidism | Normal | ↑ | ↑ | ↓↓ | Hyperthyroid |
| Primary hypothyroidism | Normal | ↓ | ↓ | ↑↑ | Hypothyroid |
| Secondary (pituitary) hypothyroidism | Normal | ↓ | ↓ | Low/Normal | Hypothyroid |
| Sick euthyroid (NTI) | ↓ | ↓ | Normal/↓ | Low/Normal | Euthyroid (ill) |
9. TFT Pattern Interpretation - Clinical Summary
| Condition | TSH | FT4 | FT3 | Total T4 | Total T3 |
|---|
| Normal | Normal | Normal | Normal | Normal | Normal |
| Primary hyperthyroidism | ↓ | ↑ | ↑ | ↑ | ↑ |
| Subclinical hyperthyroidism | ↓ | Normal | Normal | Normal | Normal |
| T3 toxicosis | ↓ | Normal | ↑ | Normal | ↑ |
| Primary hypothyroidism | ↑ | ↓ | ↓ | ↓ | Normal/↓ |
| Subclinical hypothyroidism | ↑ | Normal | Normal | Normal | Normal |
| Secondary hypothyroidism | Normal/↓ | ↓ | ↓ | ↓ | ↓ |
| Thyroid hormone resistance | Normal/↑ | ↑ | ↑ | ↑ | ↑ |
| Sick euthyroid / NTI | Low/Normal | Normal/↓ | ↓↓ | ↓ | ↓↓ |
10. Practical Order of Testing
- Step 1 - Always start with TSH: Most sensitive single screening test
- Step 2 - If TSH is abnormal: Measure FT4 (and FT3 if TSH suppressed but FT4 normal)
- Step 3 - Total T4/T3: Used when binding protein abnormalities are suspected, or in specific scenarios like T3 toxicosis screening
- Free T4 Index: Used when direct FT4 immunoassay may be unreliable (e.g., pregnancy, critical illness)
- TRH stimulation test: Now largely obsolete due to highly sensitive TSH assays
Key Teaching Points
- TSH is the master test - amplified, logarithmic response makes it the most sensitive indicator
- Free hormones = biologically active - they reflect actual tissue hormone exposure
- Total hormones = mostly bound - they change with protein levels, not just thyroid function
- T4 is the thyroid's main product; T3 is the main active hormone produced peripherally
- Never rely on Total T4/T3 alone when binding protein levels may be abnormal
- FT3 is the most specific test for T3 thyrotoxicosis and early hyperthyroidism
- In pituitary/hypothalamic disease, do not use TSH alone - always add FT4
Sources: Harrison's Principles of Internal Medicine 22E, p.3069; Schwartz's Principles of Surgery 11E; Henry's Clinical Diagnosis and Management by Laboratory Methods; Tintinalli's Emergency Medicine