Types of biopsy

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Types of Biopsy

A biopsy is the removal of tissue or cells from a living body for histopathological, cytological, or microbiological examination. It is the definitive investigation for any suspected neoplasm or obscure lesion. Biopsies are classified by technique, extent of tissue removed, and the method of access.

1. Needle Biopsy

A hollow needle is inserted into the lesion and a core or aspirate of tissue is obtained, without open surgery.

a) Fine Needle Aspiration (FNA / FNAC)

  • A 20-22G needle is used to aspirate cells
  • Provides cytological information only - no tissue architecture
  • Cannot distinguish invasive from non-invasive tumour (e.g., invasive vs. in-situ breast carcinoma)
  • Relatively safe, quick, and performed under palpation or image guidance
  • Best for: thyroid nodules, lymph nodes, salivary gland masses, solid breast masses

b) Core Needle Biopsy (CNB / Trucut Biopsy)

  • 14-16G cutting needle (e.g., Travenol Tru-cut, Vim-Silvermann needle) removes a core of tissue
  • Provides histological information - tissue architecture is preserved
  • More advantageous than FNA when histologic findings affect therapy (e.g., distinguishing atypical ductal hyperplasia from carcinoma)
  • Can be done by direct palpation or with CT/ultrasound/stereotactic imaging guidance
  • Risk: 19-44% false-negative rate for atypical ductal hyperplasia on core biopsy
"Core biopsy specimens, like fine-needle aspirations, have the disadvantage of introducing sampling error." - Schwartz's Principles of Surgery, 11th ed.

c) Drill Biopsy

  • A small sharp cannula attached to a high-speed compressed-air drill
  • Primarily used for breast lumps
  • Accuracy >90% claimed for breast pathology
  • Considered superior to simple needle biopsy for this indication

2. Punch Biopsy

  • A circular cutting instrument (punch, 2-8 mm diameter) is rotated through the skin/mucosa under pressure
  • Skin is stretched perpendicular to relaxed skin tension lines before punching - this creates an elliptical wound that can be sutured linearly
  • Reaches epidermis, papillary dermis, and reticular dermis; deeper than shave biopsy
  • Requires sutures
  • Used for: dermal lesions, inflammatory skin diseases, infectious processes, subcutaneous lesions
  • Also used endoscopically (punch forceps) for mucosal lesions of GI tract, bladder, bronchus
  • A variation allows "narrow-hole extrusion" to remove larger benign subcutaneous growths (e.g., lipoma) through a small cutaneous portal
  • Andrews' Diseases of the Skin, p. 1020

3. Shave Biopsy

  • A No. 15 blade scalpel or flexed razor blade makes a horizontal incision through elevated skin lesions
  • Lesion is pinched between fingers and removed with sweeping strokes
  • Specimen: epidermis + papillary dermis (occasionally reticular dermis in elevated lesions)
  • Heals by second intention; no sutures needed
  • Best for: pedunculated/papular/exophytic lesions, superficial BCCs, SCC in-situ, lentigo maligna, benign nevi for recontouring
  • Disadvantage: inadequate for deep dermal or subcutaneous pathology (e.g., discoid lupus erythematosus)

Saucerization (Deep Shave) Biopsy

  • A shave variant where the blade is angulated to go deliberately deeper
  • Provides the entire lesion or a large portion for histological analysis
  • Preferred for: atypical melanocytic nevi where thin melanoma is in the differential, hypertrophic AK vs. minimally invasive SCC, keratoacanthoma

4. Open (Surgical) Biopsy

Tissue obtained by formal surgical incision. Two subtypes:

a) Incisional Biopsy

  • Only a wedge or slice of tissue is removed from part of the lesion (typically from the thickest/darkest margin), along with some adjacent normal tissue
  • Indicated for large lesions where excisional biopsy is not feasible (e.g., face, hands, feet, or anatomically constrained locations)
  • Theoretical disadvantage: may spread tumour cells to adjacent tissues
  • Always sample the margin of a lesion, not the necrotic centre

b) Excisional Biopsy

  • The entire lesion is excised with a margin of healthy surrounding tissue
  • Preferred and safer approach where feasible
  • Allows full histopathological examination of the entire specimen
  • Detects malignant change within a presumed benign tumour
  • Curative intent: surgeon must ensure negative margins, orient the specimen with sutures/clips, and ensure the incision directly overlies the area (no tunnelling)
  • Indicated for: pigmented lesions suspicious for melanoma, lesions where core biopsy is non-diagnostic
"Whenever possible, excisional biopsy should be carried out in case of suspected tumours." - S Das, Manual of Clinical Surgery, 13th ed.

5. Scissors (Snip) Biopsy

  • Iris or Gradle scissors snip the base of a pedunculated lesion
  • Often no anaesthesia required
  • Tissue above the epidermal connection is removed
  • Heals by second intention
  • Best for: skin tags, fibroepithelial polyps

6. Curettage Biopsy

  • A curette scrapes lesions involving the epidermis (e.g., seborrhoeic keratoses, actinic keratoses, verrucae)
  • Provides epidermal sheets or fragments of epidermis and dermis
  • Also used to confirm BCC clinically prior to definitive treatment
  • No sutures; heals by second intention

7. Endoscopic Biopsy

  • Biopsy forceps passed through the working channel of an endoscope (colonoscope, bronchoscope, cystoscope, gastroscope)
  • Forceps are opened, pressed into the lesion, closed, and withdrawn
  • Key principles:
    • Biopsy from the margin/edge of an ulcer or suspicious area, not the necrotic base
    • For gastric ulcers: four-quadrant biopsy from the edges
    • Polyps should be completely excised rather than partially biopsied (muscularis mucosae invasion can't be assessed from a fragment)
    • Barium enema should not be performed within 10 days of a GI biopsy (risk of perforation)
    • Contraindicated in patients on anticoagulants

8. Sentinel Lymph Node Biopsy (SLNB)

  • A minimally invasive technique to sample the first draining lymph node(s) from a primary tumour
  • Lymphatic mapping uses blue dye (e.g., patent blue) ± radiolabelled colloid injected peritumorally
  • Avoids full lymph node dissection (and its morbidity) in patients whose sentinel node is negative
  • Standard staging for melanoma and breast cancer
  • Must be performed prior to wide local excision of the primary

Summary Table

TypeTissue ObtainedKey Use
FNACells only (cytology)Thyroid, lymph node, salivary gland
Core needleTissue core (histology)Breast, liver, prostate, soft tissue
Punch biopsyFull-thickness skin plugInflammatory/dermal skin lesions
Shave biopsyEpidermis + superficial dermisElevated/epidermal lesions
SaucerizationEpidermis + deep dermisAtypical nevi, SCC vs. AK
ScissorsPedunculated tissueSkin tags, polyps
CurettageEpidermal fragmentsAK, SK, verrucae, BCC confirmation
IncisionalPart of lesionLarge/inaccessible lesions
ExcisionalEntire lesionPreferred for most tumours
EndoscopicMucosal fragmentsGI, bronchial, bladder lesions
Sentinel nodeLymph nodeStaging of melanoma, breast cancer

Sources:
  • S Das, A Manual on Clinical Surgery, 13th ed.
  • Schwartz's Principles of Surgery, 11th ed.
  • Andrews' Diseases of the Skin, Clinical Dermatology
  • Dermatology, 5th ed. (Elsevier)
  • Fitzpatrick's Dermatology, 9th ed.
  • Pfenninger and Fowler's Procedures for Primary Care, 3rd ed.

Classification of bipsy w.r.t. dental

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classification of biopsy in oral and maxillofacial surgery dentistry

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https://uomus.edu.iq/img/lectures21/MUCLecture_2025_52811502…

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oral biopsy classification technique timing material site dental surgery textbook

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Here is a thorough, dental-focused classification of biopsy:

Classification of Biopsy in Dentistry (Oral and Maxillofacial Surgery)

Biopsy is the most definitive investigation for any oral lesion that persists for 2 weeks or longer after removal of local irritants (e.g., sharp tooth edge, denture trauma). Multiple classification frameworks are used in dental practice.

I. Based on Access / Location of the Lesion

TypeDescription
Direct biopsyLesion is superficial, visible, and easily accessible (e.g., buccal mucosa ulcer)
Indirect biopsyLesion lies deep, covered by normally appearing mucosa/tissue (e.g., intraosseous lesion, deep salivary gland mass)

II. Based on Technique (Primary Classification)

1. Incisional Biopsy

  • Removes only a representative portion of the lesion plus a margin of adjacent normal tissue
  • Preferred when the lesion is >1 cm in diameter, shows differing characteristics at different sites, or is suspected malignant/premalignant
  • Key surgical principles:
    • A wedge-shaped incision is made, wide at the surface and converging at depth
    • Biopsy from the active periphery (margin), not the necrotic/ulcerated centre
    • A narrow, deep specimen is better than a broad, shallow one
    • Include adequate depth to capture the base of the lesion
    • In a large lesion with differing zones, multiple samples are taken and each placed in a separately labelled container, with a schematic diagram submitted to the pathologist
  • Indications:
    • Large lesions not amenable to complete excision
    • Suspected carcinoma or precancerous lesion (leukoplakia, erythroplakia)
    • Lesion with diffuse or irregular borders
    • Pigmented, vascular, or indurated lesions
    • Deeply infiltrating lesions

2. Excisional Biopsy

  • The entire lesion is removed with a 2-3 mm perimeter of normal tissue all around
  • Indicated for lesions ≤1 cm that are clinically benign
  • If the lesion appears malignant, pigmented, vascular, or has diffuse borders, an additional 2-3 mm of normal-appearing peripheral tissue is taken
  • Often constitutes definitive treatment as well as diagnosis
  • Lesion depth must be assessed by palpation before incision; the incision should exceed the total depth of the lesion slightly
  • Incisions should be oriented parallel to nerves, blood vessels, and lines of muscular tension (smile lines, facial creases) to minimize secondary injury and improve aesthetics
  • Indications: small benign-appearing lesions (fibroma, mucocele, small papilloma, retention cysts)
"Complete excision often constitutes definitive treatment of the lesion biopsied." - Biopsy in Oral and Maxillofacial Surgery, University of Mosul lecture series, 2025

3. Aspiration Biopsy

Performed with a needle and syringe by penetrating the lesion and aspirating its contents. Two major subtypes in oral surgery:

a) Diagnostic Aspiration (Fluid Aspiration)

  • Used to determine if an intraosseous radiolucent lesion contains fluid, blood, or air before entering a bony cavity
  • Rules out vascular lesions (aspiration of blood = avoid entering lesion)
  • Distinguishes cystic from solid lesions
  • A 16-18 gauge needle connected to an aspirating syringe is used
  • Aspiration is performed on any fluid-filled lesion except a mucocele
  • Must always be done before incising into jaw cysts or radiolucent bone lesions

b) Fine Needle Aspiration Biopsy (FNAB)

  • A finer needle aspirates cells for cytopathological diagnosis
  • Used when:
    • A soft tissue mass is detected beneath the skin/mucosa and the patient wishes to avoid a scar
    • Adjacent anatomy makes open biopsy risky (e.g., proximity to facial nerve)
    • Diagnosis of neck masses and parotid gland lesions (FNAB is increasingly preferred for parotid due to its non-invasive nature)
  • Provides cytology only - no tissue architecture; cannot distinguish invasive from in-situ tumour

4. Cytologic Biopsy (Exfoliative Cytology / Brush Biopsy)

  • Cells are obtained from the surface of an oral lesion by scraping/brushing without formal surgical incision
  • Exfoliative cytology: gentle scraping with a spatula; provides surface epithelial cells only
  • Brush biopsy (OralCDx): a brush is rotated firmly on the lesion to obtain transepithelial cells from all layers of the epithelium
  • The smear is fixed, stained, and examined microscopically
  • Advantages: quick, non-invasive, no anaesthesia, no wound
  • Limitations: false negatives occur; a positive result still requires confirmatory incisional/excisional biopsy; cannot replace tissue biopsy
  • Indications: initial screening of suspicious white/red lesions, monitoring multiple sites, patients who refuse surgical biopsy

5. Punch Biopsy

  • A circular punch instrument (2-6 mm) is used on oral mucosal lesions
  • Best suited for the hard palate and sites where mucosa is bound down (not freely movable)
  • Heals by secondary intention
  • Produces a comparable specimen to scalpel biopsy but may be technically difficult on mobile oral tissues
  • No proven advantage over scalpel biopsy in the oral cavity

III. Based on Instrument / Material Used

InstrumentComments
Scalpel (No. 15 blade)Gold standard - produces the least artefact
Biopsy punchFor hard palate/bound mucosa
Biopsy forcepsEndoscopic / transoral mucosal biopsy
Needle/syringeAspiration biopsy
ElectrocauteryAvoid - causes thermal artefact, distorts histology
Laser (CO₂, Nd:YAG)Less thermal damage than electrocautery but still not recommended for biopsy incisions; acceptable for wide local excision of known malignancy

IV. Based on Clinical Timing

TypeDescription
Extraoperative biopsyPerformed as a separate planned procedure before definitive surgery
Intraoperative (frozen section) biopsyPerformed during surgery; rapid processing allows immediate diagnosis to guide extent of resection; used in oral cancer surgery to assess margins

V. Based on Anatomical Site / Tissue Type in Oral Region

TissuePreferred Technique
Oral mucosa (lip, tongue, buccal, floor of mouth, palate)Incisional/excisional scalpel biopsy
Gingiva/periodontiumIncisional biopsy
Minor salivary glands (labial glands)Excisional or incisional biopsy; used in diagnosing Sjögren's syndrome, amyloidosis, sarcoidosis
Major salivary glands (parotid)FNAB preferred; open biopsy only if superficial and malignancy suspected
Jaw bones (intraosseous lesions)Aspiration first → then incisional or excisional bone biopsy via trephine or surgical access
Neck masses / lymph nodesFNAB first; excisional biopsy if lymphoma suspected (architecture needed)

VI. Based on Purpose

PurposeType
DiagnosticTo confirm a clinical diagnosis or establish histopathological diagnosis
Therapeutic (curative)Excisional biopsy removes the lesion entirely = treatment
StagingSentinel lymph node biopsy to assess regional spread
MonitoringSerial biopsies of premalignant lesions (e.g., oral submucous fibrosis, leukoplakia)

Decision Algorithm - Which Biopsy to Choose?

Oral lesion persisting >2 weeks
        ↓
Fluid-filled / intraosseous radiolucency?
        ↓ YES → Aspiration biopsy first
        ↓ NO
Size ≤1 cm, clinically benign?
        ↓ YES → Excisional biopsy
        ↓ NO
Lesion >1 cm / suspected malignant / diffuse borders?
        ↓ → Incisional biopsy (from margin, not centre)
Neck mass / parotid swelling?
        → FNAB
Surface screening / patient refuses surgery?
        → Brush biopsy / exfoliative cytology (confirmatory biopsy still needed)

Key Rules in Dental Biopsy (Surgical Principles)

  1. Always aspirate intraosseous lesions before cutting into bone - avoids catastrophic haemorrhage from vascular lesions
  2. Never biopsy from the necrotic centre - sample from the active periphery/margin
  3. Avoid electrocautery and laser for biopsy incisions - they distort histological architecture
  4. Block anaesthesia preferred over infiltration into the lesion (avoids distorting tissue planes)
  5. Narrow and deep > broad and shallow - depth gives better information about invasion
  6. Orient the specimen for the pathologist with sutures or notches
  7. Fix immediately in 10% buffered formalin (unless sending for frozen section or microbiological culture)
  8. Lesion orientation diagram should accompany every specimen submitted

Sources:
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