Here are all 11 short notes, biochemistry-focused and exam-ready:
Biochemistry Short Notes — MBBS Exam
1. G-6-PD Deficiency (Glucose-6-Phosphate Dehydrogenase Deficiency)
Definition
X-linked recessive disorder causing a deficiency of G-6-PD, the rate-limiting enzyme of the Hexose Monophosphate (HMP) shunt / Pentose Phosphate Pathway, leading to episodic hemolytic anemia.
Biochemical Basis
HMP SHUNT (Pentose Phosphate Pathway):
Glucose-6-phosphate + NADP⁺ ──[G6PD]──► 6-Phosphogluconate + NADPH
NADPH role:
NADPH + Oxidized Glutathione (GSSG) ──[Glutathione reductase]──► NADP⁺ + Reduced Glutathione (GSH)
GSH neutralizes H₂O₂ and free radicals → protects RBC membrane
IN G6PD DEFICIENCY:
↓ NADPH → ↓ GSH → RBC cannot neutralize oxidative stress
→ Hemoglobin oxidized to METHEMOGLOBIN
→ Heinz body formation (denatured Hb precipitates)
→ Rigid RBCs trapped and destroyed in spleen
→ HEMOLYTIC ANEMIA
Genetics
- X-linked recessive (males affected, females are carriers)
- Most common: G6PD-A- (African variant), G6PD-Mediterranean (more severe)
- Affects ~500 million people worldwide
Precipitants of Hemolysis ("PRIMA")
- Primaquine, dapsone (oxidant drugs)
- Radicals from infection (commonest trigger)
- Ingestion of fava beans (favism)
- Metabolic acidosis
- Aspirin, sulfonamides, nitrofurantoin
Clinical Features
- Episodic hemolytic anemia (usually triggered)
- Jaundice, pallor, dark urine (hemoglobinuria)
- Back/flank pain
- Between episodes: completely normal
Lab Findings
- Blood film: Heinz bodies (supravital stain), bite cells, blister cells
- ↓ Hb, ↑ reticulocytes, ↑ LDH, ↑ unconjugated bilirubin
- Fluorescent spot test (screening) - NADPH detected
- Quantitative G6PD enzyme assay - confirmatory
Key Biochemistry Points
- G6PD is the only source of NADPH in RBCs (no mitochondria → no other NADPH source)
- G6PD activity decreases as RBCs age; old cells most vulnerable
- Do not test during acute hemolysis (reticulocytes have high enzyme levels → false normal)
2. Metabolic Acidosis
Definition
Primary disorder characterized by ↓ blood pH and ↓ HCO₃⁻, caused by gain of fixed acids or loss of bicarbonate.
Biochemical Classification: Anion Gap
Anion Gap (AG) = Na⁺ - (Cl⁻ + HCO₃⁻)
Normal AG = 8-12 mEq/L (unmeasured anions: albumin, phosphate, sulfate, organic acids)
METABOLIC ACIDOSIS
│
├── HIGH ANION GAP (>12) ── "MUDPILES"
│ Methanol / Metformin
│ Uremia (renal failure)
│ Diabetic ketoacidosis (DKA)
│ Propylene glycol / Paracetamol
│ Isoniazid / Iron / Inborn errors
│ Lactic acidosis
│ Ethylene glycol
│ Salicylates
│
└── NORMAL ANION GAP (hyperchloremic) ── "HARD UP"
Hyperalimentation (TPN)
Acetazolamide / Addison's disease
Renal tubular acidosis (RTA)
Diarrhea (loss of HCO₃⁻)
Ureteral diversion
Post-hypocapnia
Bicarbonate Buffer System
H⁺ + HCO₃⁻ ⇌ H₂CO₃ ⇌ H₂O + CO₂
- CO₂ regulated by lungs; HCO₃⁻ regulated by kidneys
Compensation
- Respiratory compensation: ↓ PCO₂ (Kussmaul breathing - deep, rapid)
- Expected PCO₂ = 1.5 × [HCO₃⁻] + 8 ± 2 (Winter's formula)
- Kidneys: ↑ H⁺ excretion, ↑ HCO₃⁻ reabsorption, ↑ NH₄⁺ excretion
ABG in Metabolic Acidosis
| Parameter | Change |
|---|
| pH | < 7.35 |
| HCO₃⁻ (primary) | ↓ (<22 mEq/L) |
| PCO₂ (compensatory) | ↓ |
Clinical Features
- Kussmaul respiration (fruity odour in DKA)
- Nausea, vomiting
- Cardiac: arrhythmias, ↓ cardiac output, vasodilation, hypotension
- CNS: confusion → coma
- Hyperkalemia (H⁺ shifts into cells in exchange for K⁺)
Treatment
- Treat underlying cause
- NaHCO₃ (if pH <7.1 or severe symptoms)
- Dialysis (renal failure, methanol, ethylene glycol)
3. Complications of Diabetes Mellitus
Biochemical Basis
Hyperglycemia drives four major pathways of damage:
CHRONIC HYPERGLYCEMIA
│
┌───────┼──────────────────────────────┐
▼ ▼ ▼ ▼
Polyol AGEs PKC pathway Hexosamine
pathway (Advanced activation pathway
Glycation
End-products)
1. Polyol (Sorbitol) Pathway
- Glucose → Sorbitol (aldose reductase) → Fructose
- Sorbitol accumulates in lens, nerves, kidney, retina (impermeable to cell membrane)
- → Cell swelling, osmotic damage → Cataracts, neuropathy
- ↓ NADPH used (less GSH → oxidative stress)
2. Advanced Glycation End-products (AGEs)
- Glucose non-enzymatically glycates proteins → Schiff base → Amadori products → AGEs
- Example: HbA1c (glycated hemoglobin) - reflects glucose control over 3 months
- AGE-crosslinks collagen → basement membrane thickening → microangiopathy
- AGE receptors (RAGE) → inflammatory signaling → macrovascular disease
3. Protein Kinase C (PKC) Activation
- ↑ Diacylglycerol → PKC activation → ↑ VEGF, TGF-β, fibronectin
- → Basement membrane thickening, neovascularization (→ retinopathy)
- → Glomerular hypertrophy, ↑ albumin filtration (→ nephropathy)
4. Hexosamine Pathway
- Excess glucose → glucosamine-6-phosphate → modifies proteins via O-GlcNAc
- → Gene expression changes → ↑ TGF-β, PAI-1 → fibrosis, thrombosis
Microvascular Complications
| Complication | Key Feature |
|---|
| Retinopathy | Non-proliferative → proliferative; VEGF-driven neovascularization; leading cause of blindness |
| Nephropathy | Microalbuminuria → proteinuria → nephrotic syndrome → CKD; Kimmelstiel-Wilson nodules |
| Neuropathy | Sensory (glove-stocking), autonomic (gastroparesis, impotence), mononeuritis |
Macrovascular Complications
- Atherosclerosis: ↑ LDL glycation → foam cells; ↑ PAI-1 → thrombosis
- Ischemic heart disease, stroke, peripheral arterial disease
Acute Complications
| Complication | Biochemistry |
|---|
| DKA (Type 1) | Insulin absent → ↑ lipolysis → ↑ FFA → ↑ ketone bodies (acetoacetate, β-hydroxybutyrate) → HIGH AG metabolic acidosis |
| HHS (Type 2) | Severe hyperglycemia (>600 mg/dL), hyperosmolality, no significant ketosis (residual insulin inhibits lipolysis) |
| Hypoglycemia | Over-treatment with insulin |
4. Protein Misfolding and Associated Disorders
Normal Protein Folding
- Polypeptide chain folds into unique 3D native conformation (thermodynamically most stable)
- Assisted by molecular chaperones (Hsp70, Hsp90, GroEL) which prevent premature aggregation
- Proteosomes (ubiquitin-proteasome system) degrade abnormally folded proteins
Misfolding - Biochemical Basis
CORRECTLY FOLDED PROTEIN (native, α-helical, soluble)
│
─── MUTATION / STRESS ───
│
▼
MISFOLDED PROTEIN
(exposes hydrophobic regions)
│
┌─────────┴──────────────────┐
▼ ▼
Chaperone rescue AGGREGATION
(refolding or → β-sheet rich
degradation) fibrils (amyloid)
→ TOXIC to cells
Types of Misfolding Disorders
| Category | Disease | Protein | Key Feature |
|---|
| Amyloidoses | AL amyloidosis | Immunoglobulin light chains | Plasma cell disorder |
| AA amyloidosis | Serum amyloid A (SAA) | Secondary to chronic inflammation |
| Senile cardiac amyloidosis | Transthyretin (TTR) | Elderly; heart failure |
| Neurodegenerative | Alzheimer's disease | Aβ peptide + tau | Amyloid plaques + neurofibrillary tangles |
| Parkinson's disease | α-synuclein | Lewy bodies in neurons |
| Huntington's disease | Huntingtin (polyQ expansion) | Cytoplasmic inclusions |
| ALS | SOD1, TDP-43 | Motor neuron death |
| Prion diseases | CJD, scrapie, BSE | PrP^Sc (prion protein) | Infectious misfolding; normal PrP^C → PrP^Sc |
| ER stress diseases | Cystic fibrosis | CFTR ΔF508 | Misfolded protein retained in ER, degraded |
| Gain of function | Sickle cell anemia | HbS (Glu→Val) | Polymerization under low O₂ |
Amyloid - Key Biochemistry
- All amyloid fibrils share a common cross-β pleated sheet structure
- Stain with Congo red (apple-green birefringence under polarized light)
- Deposited extracellularly → organ dysfunction (heart, kidney, liver, nerves)
Prion Disease - Unique Mechanism
- PrP^C (normal, α-helical) → PrP^Sc (abnormal, β-sheet rich)
- PrP^Sc acts as a template to convert PrP^C → PrP^Sc (conformational propagation)
- Entirely protein-only infectious agent (no nucleic acid)
- Resistant to protease, heat, UV radiation
ER Stress and Unfolded Protein Response (UPR)
- Accumulation of misfolded proteins in ER triggers UPR
- UPR: Attempts to restore homeostasis (↑ chaperones, ↑ ERAD)
- Prolonged UPR → apoptosis → β-cell loss (Type 2 DM)
5. Hyperkalemia and Hypokalemia
Normal Serum Potassium: 3.5 - 5.0 mEq/L
(98% of total body K⁺ is intracellular; only 2% is extracellular)
HYPOKALEMIA (K⁺ < 3.5 mEq/L)
Causes:
↓ INTAKE: Starvation, alcoholism
↑ LOSSES:
• GI: Diarrhea, vomiting, NG suction, laxative abuse
• Renal: Diuretics (loop/thiazide), hyperaldosteronism, RTA,
hypomagnesemia, Cushing's syndrome, Bartter syndrome
TRANSCELLULAR SHIFT:
• Insulin, catecholamines, alkalosis, β-agonists
→ K⁺ enters cells in exchange for H⁺
Biochemical Effects:
- Resting membrane potential becomes more negative (hyperpolarization) → muscle weakness
- Impaired insulin secretion → hyperglycemia
- ↑ Ammonia production (metabolic alkalosis worsened)
- Metabolic alkalosis (K⁺ leaves cells in exchange for H⁺)
ECG Changes (in order):
- Flat/inverted T waves
- Prominent U waves (after T wave, in V2-V3)
- ST depression
- Prolonged QU interval
- Severe: Ventricular arrhythmias, VF
Clinical Features: Muscle weakness, cramps, constipation, ileus, polyuria (nephrogenic DI), cardiac arrhythmias
Treatment: Oral/IV KCl replacement; treat cause; correct hypomagnesemia
HYPERKALEMIA (K⁺ > 5.0 mEq/L)
Causes:
↑ INTAKE: Excessive IV KCl, blood transfusions
↓ EXCRETION:
• Renal failure (most common)
• ACE inhibitors, ARBs, K-sparing diuretics
• Addison's disease (↓ aldosterone)
• Hypoaldosteronism (type 4 RTA)
TRANSCELLULAR SHIFT (OUT of cells):
• Acidosis (H⁺ enters → K⁺ exits)
• Insulin deficiency (DKA)
• Cell lysis (hemolysis, rhabdomyolysis, tumor lysis)
• Succinylcholine (depolarizing NMJ blocker)
• Beta-blockers
PSEUDOHYPERKALEMIA:
• Thrombocytosis, leukocytosis, improper sample collection
Biochemical Effects:
- Resting membrane potential becomes less negative (depolarization) → initial excitation → then inexcitability
- Inhibits ammoniagenesis → metabolic acidosis worsened
ECG Changes (in order of severity):
- Peaked (tall, narrow, symmetric) T waves (earliest sign)
- Prolonged PR interval
- Widened QRS
- Sine wave pattern
- Ventricular fibrillation / Asystole
Treatment (A-C-D-D-D-D):
- Calcium gluconate (membrane stabilization - cardioprotective, fastest)
- Insulin + Dextrose (shift K⁺ into cells)
- Sodium bicarbonate (shift K⁺ into cells if acidosis)
- Salbutamol (β₂ agonist - shifts K⁺ into cells)
- Kayexalate (sodium polystyrene sulfonate - removes K⁺ from gut)
- Dialysis (definitive removal)
6. Acute Phase Plasma Proteins and Their Clinical Significance
Definition
Proteins whose plasma concentration changes by ≥25% within hours to days in response to infection, inflammation, trauma, or malignancy.
Stimulus: IL-1β, IL-6, TNF-α from macrophages → Liver hepatocytes → synthesis of acute phase proteins
Classification
POSITIVE Acute Phase Proteins (↑ in inflammation):
| Protein | Function | Clinical Use |
|---|
| C-Reactive Protein (CRP) | Opsonization, complement activation, binds phosphocholine on bacteria | Marker of inflammation, infection, MI; guides antibiotic therapy |
| Serum Amyloid A (SAA) | Precursor of AA amyloid | Chronic inflammation → secondary amyloidosis |
| Fibrinogen | Coagulation (forms fibrin) | ↑ ESR (coats RBCs → rouleaux); thrombosis risk |
| Haptoglobin | Binds free Hb (prevents renal loss) | ↓ in hemolysis (consumed); distinguishes hemolysis |
| Ceruloplasmin | Copper transport; ferroxidase activity | ↓ in Wilson's disease; ↑ in inflammation |
| Alpha-1 antitrypsin (A1AT) | Serine protease inhibitor (inhibits elastase) | ↓ in A1AT deficiency → emphysema, liver cirrhosis |
| Alpha-2 macroglobulin | Broad-spectrum protease inhibitor | ↑ in nephrotic syndrome (large molecule, not lost) |
| Transferrin | Iron transport | ↓ in inflammation (negative APP); ↑ in iron deficiency |
| Ferritin | Iron storage | ↑ in inflammation; ↑ in haemochromatosis |
| Complement proteins (C3, C4) | Opsonization, lysis | ↑ in acute inflammation |
| Prothrombin, factor VIII | Coagulation | ↑ procoagulant state during acute phase |
NEGATIVE Acute Phase Proteins (↓ in inflammation):
| Protein | Reason for Fall |
|---|
| Albumin | ↓ synthesis (resources diverted); ↑ vascular permeability; ↑ volume of distribution |
| Transferrin | ↓ synthesis during APR (sequesters iron away from pathogens) |
| Prealbumin (transthyretin) | Short half-life (2 days); best early marker of nutritional status |
| Retinol-binding protein | ↓ in malnutrition and inflammation |
Clinical Significance Summary
| Protein | Clinical Use |
|---|
| CRP | Monitoring infection/inflammation; cardiovascular risk (hs-CRP); guides antibiotic therapy |
| Haptoglobin | Diagnosing hemolysis (undetectable when consumed) |
| A1AT | Screening for emphysema/cirrhosis in young patients |
| Ceruloplasmin | Diagnosing Wilson's disease |
| Prealbumin | Nutritional assessment (ICU/malnutrition) |
| SAA | Monitoring AA amyloid risk in chronic inflammatory disease |
| Fibrinogen | Coagulation testing; ↑ ESR interpretation |
7. Normal vs. Abnormal Serum Electrophoresis Patterns
Principle
Serum proteins separated by electrophoresis (movement in electric field based on charge and size at alkaline pH). Separated into 5 bands stained with dyes (e.g., Coomassie blue):
Normal Serum Electrophoresis Pattern
HIGH ANODE (+) CATHODE (-)
│ │ │
│ │ ALBUMIN (largest peak) │
│ │ /\ │
│ │/ \ α1 α2 β γ │
│ │ \ /\ /\ /\ /\ (smaller) │
Conc │ │ \/ \/ \/ \/ │
│ └───────────────────────────────────┘
LOW │
| Band | Proteins | Normal % | Normal g/dL |
|---|
| Albumin | Albumin | ~60% | 3.5-5.0 |
| α1 (alpha-1) | A1AT, HDL, orosomucoid | 2-4% | 0.2-0.4 |
| α2 (alpha-2) | Haptoglobin, ceruloplasmin, α2-macroglobulin | 6-12% | 0.5-0.9 |
| β (beta) | Transferrin, LDL, C3, fibrinogen | 10-15% | 0.7-1.3 |
| γ (gamma) | Immunoglobulins (IgG, IgA, IgM, IgD, IgE) | 15-20% | 0.7-1.6 |
Abnormal Patterns
1. Multiple Myeloma → M-spike (Monoclonal Gammopathy)
- Narrow, tall, sharp spike in γ (or β) region
- All molecules are identical (monoclonal = same Ig class + same light chain)
- Bence-Jones proteins (free light chains) in urine
- ↓ Normal immunoglobulins (immunoparesis)
2. Chronic Infections / Liver Disease → Polyclonal Gammopathy
- Broad, diffuse ↑ in γ region
- All Ig classes increased (polyclonal)
- Seen in: cirrhosis, SLE, HIV, chronic infections
3. Nephrotic Syndrome
- ↓ Albumin (lost in urine)
- ↑ α2 band (↑ α2-macroglobulin - too large to be lost)
- ↑ β band (↑ LDL due to compensatory synthesis)
4. Acute Inflammation
- ↑ α1 and α2 bands (acute phase proteins)
- ↓ Albumin
- Normal γ
5. α1-Antitrypsin Deficiency
- Absent α1 band (A1AT is the major α1 protein)
6. Protein Malnutrition / Liver Failure
- ↓ Albumin (↓ synthesis)
- ↓ α1, α2, β bands
- "β-γ bridging" in liver cirrhosis (IgA spans between β and γ)
7. Hemolysis
- ↓ α2 band (haptoglobin consumed)
Summary Table
| Condition | Albumin | α1 | α2 | β | γ |
|---|
| Normal | ↔ | ↔ | ↔ | ↔ | ↔ |
| Myeloma | ↓ | ↓ | ↓ | ↔/↑ | M-spike ↑↑ |
| Nephrotic | ↓↓ | ↓ | ↑↑ | ↑ | ↓ |
| Cirrhosis | ↓ | ↓ | ↓ | ↑ | ↑ (polyclonal + β-γ bridge) |
| Acute inflammation | ↓ | ↑ | ↑ | ↔ | ↔ |
| A1AT deficiency | ↔ | ↓↓ | ↔ | ↔ | ↔ |
8. Infant Respiratory Distress Syndrome (IRDS) / Neonatal RDS
Definition
Life-threatening respiratory disorder in premature neonates (<37 weeks, especially <28 weeks) caused by deficiency of pulmonary surfactant, leading to alveolar collapse (atelectasis).
Pulmonary Surfactant - Biochemistry
Composition:
- 90% phospholipids:
- Dipalmitoylphosphatidylcholine (DPPC) / Lecithin - the most important surfactant lipid (~40%)
- Phosphatidylglycerol (PG) - helps spreading
- Sphingomyelin - not a surfactant component (constant amount)
- 10% proteins: SP-A, SP-B, SP-C (hydrophobic, aid spreading), SP-D
Function of Surfactant:
- Reduces surface tension at the air-liquid interface of alveoli
- Prevents alveolar collapse at end-expiration (LaPlace law: P = 2T/r; ↓T → ↓P needed)
- Allows lungs to maintain FRC (functional residual capacity)
Synthesis:
- Made by Type II pneumocytes (alveolar epithelial cells) - mature after 34-36 weeks gestation
- CDP-choline pathway (Kennedy pathway): Choline → Phosphocholine → CDP-choline → PC (lecithin)
- Surfactant stored in lamellar bodies → secreted into alveolar space
L:S Ratio (Lecithin:Sphingomyelin Ratio)
- Measured in amniotic fluid (amniocentesis)
- Lecithin rises with fetal lung maturity; sphingomyelin stays constant
- L:S ratio <2.0 → lung immaturity → high risk of IRDS
- L:S ratio ≥2.0 → lung maturity → low risk
- Phosphatidylglycerol (PG) present → additional marker of maturity
Pathophysiology
PREMATURITY (<34 weeks)
│
▼
↓ Type II pneumocyte maturation
│
▼
↓ Surfactant synthesis (↓ DPPC)
│
▼
↑ Surface tension → alveolar collapse (atelectasis)
│
▼
↓ Compliance, ↓ lung volume
│
▼
Hypoxia → Acidosis
│
▼
Pulmonary vasoconstriction → R→L shunt
│
▼
Ischemic damage to Type II cells → ↓↓ surfactant
│
▼
Protein-rich exudate → HYALINE MEMBRANE formation
(Fibrin + necrotic cells lining alveolar ducts)
Clinical Features
- Onset within 4-6 hours of birth (premature neonate)
- Tachypnea, grunting (attempts to maintain positive end-expiratory pressure), nasal flaring
- Intercostal and subcostal retractions
- Cyanosis
- CXR: Ground-glass opacity (bilateral fine granular haziness), air bronchograms, low lung volumes
Treatment
- Antenatal corticosteroids (betamethasone/dexamethasone) to mother >24 hrs before birth - accelerates fetal lung maturity, ↑ surfactant synthesis
- Exogenous surfactant replacement (intratracheal): Beractant (natural), Poractant alfa (Curosurf), Calfactant
- Oxygen support: CPAP (continuous positive airway pressure) or mechanical ventilation
- Supportive: warmth, nutrition, IV fluids
9. Jaundice
Definition
Yellowish discoloration of skin, sclerae, and mucous membranes due to deposition of bilirubin when serum bilirubin >2 mg/dL (clinical jaundice; lab detectable at >1 mg/dL = latent jaundice).
Bilirubin Metabolism - Biochemistry
HEME (from destroyed RBCs, 80%)
│
▼ [Heme oxygenase] (in RES - liver, spleen, bone marrow)
BILIVERDIN + CO + Fe²⁺
│
▼ [Biliverdin reductase]
BILIRUBIN (unconjugated / indirect)
(fat soluble, insoluble in water, TOXIC to brain)
│
▼ Binds albumin for transport in blood
│
▼ Enters hepatocytes via OATP transporters
│
▼ [UDP-glucuronosyltransferase (UGT1A1)] in SER
BILIRUBIN DIGLUCURONIDE (conjugated / direct)
(water soluble, NON-toxic, can be excreted in bile)
│
▼ Excreted into bile via MRP2 (canalicular transporter)
│
▼ Intestine: [Bacterial β-glucuronidase]
UROBILINOGEN
│
├──► 20% reabsorbed → portal blood → liver (enterohepatic circulation)
│ small amount → blood → kidney → UROBILINOGEN IN URINE (normal)
│
└──► 80% → Oxidized in gut → STERCOBILIN (brown color of feces)
Classification of Jaundice
| Type | Cause | Bilirubin | Urine | Stool | Other |
|---|
| Pre-hepatic (Hemolytic) | ↑ RBC destruction (hemolysis) | ↑ Unconjugated | ↑ Urobilinogen; NO bilirubin | Normal/dark | ↑ LDH, ↓ haptoglobin |
| Hepatic (Hepatocellular) | Liver cell damage (hepatitis, cirrhosis) | ↑ Both (mixed) | Bilirubin + urobilinogen ↑ | Pale | ↑ AST, ALT, ↑ PT |
| Post-hepatic (Obstructive) | Bile duct obstruction (stones, cancer) | ↑ Conjugated | Bilirubin ++ ; NO urobilinogen | Pale/clay | ↑ ALP, GGT; dark urine, pruritus |
Specific Syndromes
| Syndrome | Defect | Bilirubin | Feature |
|---|
| Gilbert's syndrome | ↓ UGT1A1 (30%) | ↑ Unconjugated | Benign; fasting/stress triggers; no treatment needed |
| Crigler-Najjar type I | Complete absence of UGT1A1 | ↑↑↑ Unconjugated | Severe kernicterus; fatal without phototherapy/transplant |
| Crigler-Najjar type II | Partial UGT1A1 deficiency | ↑ Unconjugated | Responds to phenobarbitone |
| Dubin-Johnson syndrome | Defective MRP2 (canalicular transport) | ↑ Conjugated | Black liver (melanin-like pigment); benign |
| Rotor syndrome | Defective hepatic storage | ↑ Conjugated | Benign; normal liver |
Neonatal (Physiological) Jaundice
- Appears day 2-3; resolves by day 10-14
- Causes: immature UGT1A1, ↑ RBC breakdown, short-lived fetal Hb
- Unconjugated bilirubin crosses blood-brain barrier → Kernicterus (if severe)
- Treatment: Phototherapy (converts bilirubin to water-soluble isomers); exchange transfusion
10. Glycogen Storage Disorders (Glycogenoses)
Definition
Group of inherited disorders caused by deficiency of enzymes involved in glycogen synthesis or degradation, resulting in abnormal accumulation of glycogen in various tissues.
Glycogen Metabolism Overview
GLYCOGEN SYNTHESIS:
Glucose → G-6-P → G-1-P → UDP-Glucose → GLYCOGEN
[Glycogen synthase + Branching enzyme]
GLYCOGEN DEGRADATION:
GLYCOGEN → G-1-P [Glycogen phosphorylase]
→ G-6-P [Phosphoglucomutase]
→ Free GLUCOSE [Glucose-6-phosphatase] (liver only)
[Debranching enzyme] needed at branch points
[Lysosomal acid maltase] degrades lysosomal glycogen
Classification
| Type | Name | Enzyme Deficient | Organs | Key Feature |
|---|
| 0 | — | Glycogen synthase | Liver | Fasting hypoglycemia + postprandial hyperglycemia (no glycogen made) |
| Ia | Von Gierke | Glucose-6-phosphatase (G6PC) | Liver, Kidney | Hepatomegaly, hypoglycemia, lactic acidosis, hyperuricemia, hyperlipidemia |
| Ib | Von Gierke variant | G6P translocase (SLC37A4) | Liver, kidney, neutrophils | Same as Ia + neutropenia + IBD |
| II | Pompe | Lysosomal acid α-glucosidase (GAA) | All organs (heart dominant) | Massive cardiomegaly, hypotonia, death <2 yrs; enzyme replacement available |
| III | Cori/Forbes | Debranching enzyme (AGL) | Liver, heart, muscle | Mild hepatomegaly, hypoglycemia, progressive myopathy |
| IV | Andersen | Branching enzyme (GBE1) | Liver, all tissues | Abnormal glycogen structure → cirrhosis, liver failure |
| V | McArdle | Muscle phosphorylase | Skeletal muscle | Exercise-induced cramps, no blood lactate rise on exercise, myoglobinuria |
| VI | Hers | Liver phosphorylase | Liver | Mild hepatomegaly, hypoglycemia; benign course |
| VII | Tarui | Muscle phosphofructokinase | Muscle, RBCs | Like McArdle + hemolytic anemia |
| IX | — | Phosphorylase kinase | Liver | Mild; X-linked; often benign |
High-Yield Points
- Most common: GSD Type I (Von Gierke)
- Hepatic + hypoglycemia: Types I, III, VI, IX
- Muscle + cramps: Types V, VII
- Cardiac dominant: Type II (Pompe) - ONLY GSD with enzyme replacement therapy (alglucosidase alfa)
- Lysosomal: Type II (Pompe) - only one; others are cytoplasmic
- Liver failure/cirrhosis: Type IV (Anderson)
- All autosomal recessive except Type IX (X-linked)
Key Biochemistry - GSD Type I (Von Gierke)
- G6P accumulates → diverted to: ↑ glycolysis → lactic acidosis; ↑ HMP shunt → hyperuricemia; ↑ lipogenesis → hyperlipidemia
- Both glycogenolysis AND gluconeogenesis blocked (both converge on G6P → G6Pase step)
- Treatment: Uncooked cornstarch (UCCS) to maintain euglycemia; avoid fructose/galactose
11. Clinical Significance of Competitive Inhibitors as Drugs
Definition of Competitive Inhibition
Inhibitor structurally resembles the substrate and competes for binding at the active site of an enzyme. This is reversible - effect overcome by increasing substrate concentration.
Kinetics (Michaelis-Menten)
- Vmax: UNCHANGED (can still be achieved with excess substrate)
- Km (apparent): INCREASED (↑ substrate needed to achieve half-Vmax)
- Lineweaver-Burk plot: Lines intersect on Y-axis (same Vmax; different x-intercept)
Clinically Important Competitive Inhibitor Drugs
1. Statins → HMG-CoA Reductase
- Enzyme: HMG-CoA reductase (rate-limiting step in cholesterol synthesis)
- Substrate: HMG-CoA
- Inhibitor: Statins (Atorvastatin, Simvastatin, Rosuvastatin) - structural analog of HMG-CoA
- Effect: ↓ Cholesterol synthesis in liver → ↑ LDL receptors → ↓ serum LDL
- Clinical use: Hypercholesterolemia, CVD prevention
2. Methotrexate / Trimethoprim → Dihydrofolate Reductase (DHFR)
- Enzyme: DHFR (converts dihydrofolate → tetrahydrofolate, needed for purine and thymidylate synthesis)
- Inhibitor: Methotrexate (cancer/autoimmune), Trimethoprim (antibacterial), Pyrimethamine (antiprotozoal)
- Effect: ↓ THF → ↓ nucleotide synthesis → ↓ cell proliferation
- Clinical use: Leukemia, rheumatoid arthritis, UTI, malaria
3. Allopurinol → Xanthine Oxidase
- Enzyme: Xanthine oxidase (converts hypoxanthine → xanthine → uric acid)
- Inhibitor: Allopurinol (→ converted to oxipurinol, BOTH competitive and non-competitive)
- Effect: ↓ Uric acid production
- Clinical use: Gout, hyperuricemia in GSD Type I/tumor lysis syndrome
4. ACE Inhibitors → Angiotensin-Converting Enzyme (ACE)
- Enzyme: ACE (converts Angiotensin I → Angiotensin II; degrades bradykinin)
- Inhibitor: Captopril, Enalapril, Lisinopril (competitive inhibitors at active site)
- Effect: ↓ Angiotensin II (↓ vasoconstriction, ↓ aldosterone) + ↑ bradykinin (cough/angioedema)
- Clinical use: Hypertension, heart failure, diabetic nephropathy
5. Sildenafil → Phosphodiesterase-5 (PDE-5)
- Enzyme: PDE-5 (degrades cGMP in smooth muscle of blood vessels)
- Inhibitor: Sildenafil (competitive inhibitor, structural analog of cGMP)
- Effect: ↑ cGMP → smooth muscle relaxation → vasodilation
- Clinical use: Erectile dysfunction, pulmonary arterial hypertension
6. Carbidopa → DOPA decarboxylase
- Enzyme: DOPA decarboxylase (converts L-DOPA → dopamine peripherally)
- Inhibitor: Carbidopa (does not cross BBB)
- Effect: ↑ L-DOPA reaches brain; ↓ peripheral dopamine side effects (nausea, vomiting)
- Clinical use: Parkinson's disease (combined with Levodopa)
7. Aspirin (irreversible competitive inhibitor) → COX
- Inhibitor: Aspirin - irreversibly acetylates COX-1 and COX-2 active site serine
- Effect: ↓ Prostaglandin + thromboxane A₂ synthesis → analgesia, anti-inflammatory, antiplatelet
- Note: Technically irreversible competitive inhibition (special case)
8. Eflornithine → Ornithine Decarboxylase
- Enzyme: Ornithine decarboxylase (rate-limiting step in polyamine synthesis)
- Inhibitor: Eflornithine (also inhibits hair follicle cell growth)
- Clinical use: African sleeping sickness, facial hirsutism
Pharmacological Principle: Why Competitive Inhibitors Are Useful Drugs
ADVANTAGES OF COMPETITIVE INHIBITION:
1. SELECTIVITY: Drug mimics substrate → targets specific enzyme active site
→ Fewer off-target effects
2. REVERSIBILITY: Inhibition can be reversed by ↑ substrate OR by removing drug
→ Safer; titratable dose-response
3. ENZYME ACTIVE SITE is a DRUG TARGET:
Substrate analog → blocks pathway precisely at the key step
4. ADJUSTABLE EFFECT:
Doubling dose doubles effect (unlike irreversible inhibitors)
5. COMPETITIVE RESCUE possible:
If accidental overdose: supplement with substrate can
overcome inhibition (e.g., folinic acid rescue after MTX)
Summary Table
| Drug | Target Enzyme | Competitive With | Clinical Use |
|---|
| Statins | HMG-CoA reductase | HMG-CoA | Hypercholesterolemia |
| Methotrexate | DHFR | Dihydrofolate | Cancer, RA |
| Allopurinol | Xanthine oxidase | Hypoxanthine/xanthine | Gout |
| ACE inhibitors | ACE | Angiotensin I | Hypertension, HF |
| Sildenafil | PDE-5 | cGMP | ED, PAH |
| Carbidopa | DOPA decarboxylase | L-DOPA | Parkinson's |
| Trimethoprim | DHFR (bacterial) | Dihydrofolate | UTI, PCP |
Sources: Robbins, Cotran & Kumar: Pathologic Basis of Disease; Lippincott's Illustrated Reviews: Biochemistry 8th ed.; Basic Medical Biochemistry - A Clinical Approach 6th ed.; Goldman-Cecil Medicine; Goodman & Gilman's Pharmacology; Tietz Textbook of Laboratory Medicine