Give me cycle for hmp shunt

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HMP shunt hexose monophosphate pentose phosphate pathway cycle diagram

A pathophysiology diagram illustrating the therapeutic strategy of targeting the Pentose Phosphate Pathway (PPP) in parasites such as Giardia lamblia, Trichomonas vaginalis, and Plasmodium falciparum. The pathway begins with Glucose being converted to Glucose-6P. In a normal state, Glucose-6P is processed by the bifunctional enzyme G6PD::6PGL (or GluPho in Plasmodium), leading to the production of NADPH and 6-Phosphogluconate. The 6-Phosphogluconate is then acted upon by 6PGDH to form Ribulose-5-P and more NADPH. Visually, the diagram highlights a therapeutic intervention where small-molecule inhibitors block the G6PD::6PGL complex (indicated by a red inhibition bar). This inhibition results in two critical downstream effects: a decrease in Ribulose-5-P levels, leading to 'Decreased levels of nucleic acid precursors,' and a reduction in NADPH, which impairs the 'TrxR/NTR' redox cycle. The final consequence depicted is a 'Damaged cellular redox system,' characterized by increased reactive oxygen species (ROS) and metabolic deficiency, ultimately culminating in parasite cell death. The diagram integrates chemical structures, protein surface models, and parasitic morphology to demonstrate pharmacological mechanisms.

A pathophysiology diagram illustrating the therapeutic strategy of targeting the Pentose Phosphate Pathway (PPP) in parasites such as Giardia lamblia, Trichomonas vaginalis, and Plasmodium falciparum. The pathway begins with Glucose being converted to Glucose-6P. In a normal state, Glucose-6P is processed by the bifunctional enzyme G6PD::6PGL (or GluPho in Plasmodium), leading to the production of NADPH and 6-Phosphogluconate. The 6-Phosphogluconate is then acted upon by 6PGDH to form Ribulose-5-P and more NADPH. Visually, the diagram highlights a therapeutic intervention where small-molecule inhibitors block the G6PD::6PGL complex (indicated by a red inhibition bar). This inhibition results in two critical downstream effects: a decrease in Ribulose-5-P levels, leading to 'Decreased levels of nucleic acid precursors,' and a reduction in NADPH, which impairs the 'TrxR/NTR' redox cycle. The final consequence depicted is a 'Damaged cellular redox system,' characterized by increased reactive oxygen species (ROS) and metabolic deficiency, ultimately culminating in parasite cell death. The diagram integrates chemical structures, protein surface models, and parasitic morphology to demonstrate pharmacological mechanisms.

A multi-panel metabolic flowchart illustrating biosynthetic pathways for various alkaloids and their regulation via metabolite-responsive biosensors. The central pathway shows carbon flux from a source through Glucose-6-Phosphate (G6P) into the Pentose Phosphate (PP) pathway and glycolysis (PEP, Pyruvate), feeding into the TCA cycle and shikimate pathway. Section (a) details Benzylisoquinoline Alkaloid (BIA) biosynthesis from Tyrosine, including L-DOPA and Dopamine, highlighting the use of a DOD-coupled L-DOPA biosensor and RamR variants for screening THP and (S)-reticuline production. Section (b) shows Guanine-derived Theophylline biosynthesis and the application of sensing riboswitches for drug discovery. Section (c) depicts Tryptophan-derived Ergot alkaloids, specifically D-lysergic acid, regulated by TrpR (transcriptional repressor for cell growth balance) and TnaC (activator for upregulating synthases). Section (d) illustrates Putrescine synthesis from L-arginine, monitored by a PuuR-PpuuO biosensor with GFP readout. The diagram uses standard biochemical notation and color-coded regions to differentiate specific alkaloid classes (BIAs, Ergot alkaloids, polyamines) and their respective genetic control elements.

A multi-panel metabolic flowchart illustrating biosynthetic pathways for various alkaloids and their regulation via metabolite-responsive biosensors. The central pathway shows carbon flux from a source through Glucose-6-Phosphate (G6P) into the Pentose Phosphate (PP) pathway and glycolysis (PEP, Pyruvate), feeding into the TCA cycle and shikimate pathway. Section (a) details Benzylisoquinoline Alkaloid (BIA) biosynthesis from Tyrosine, including L-DOPA and Dopamine, highlighting the use of a DOD-coupled L-DOPA biosensor and RamR variants for screening THP and (S)-reticuline production. Section (b) shows Guanine-derived Theophylline biosynthesis and the application of sensing riboswitches for drug discovery. Section (c) depicts Tryptophan-derived Ergot alkaloids, specifically D-lysergic acid, regulated by TrpR (transcriptional repressor for cell growth balance) and TnaC (activator for upregulating synthases). Section (d) illustrates Putrescine synthesis from L-arginine, monitored by a PuuR-PpuuO biosensor with GFP readout. The diagram uses standard biochemical notation and color-coded regions to differentiate specific alkaloid classes (BIAs, Ergot alkaloids, polyamines) and their respective genetic control elements.

This medical pathophysiology diagram illustrates the functional enrichment of core metabolic pathways regulated by specific histone modifications across the three phases of the Yeast Metabolic Cycle (YMC): Oxidative (OX), Respiration Burst (RB), and Respiration Control (RC). Three cellular models depict pathways including the Pentose Phosphate Pathway, Glycolysis, 1C-metabolism, TCA cycle, Fatty acid biosynthesis, and Beta-oxidation, connecting the cytosol to the mitochondria and cell membrane. Color-coded horizontal bars overlying specific pathways indicate enrichment by specific epigenetic marks: H3K9ac (red), H3K18ac (green), H3K56ac (yellow), H3K14ac (purple), H4K5ac (orange), and H3K4me3 (blue). In the OX phase, enrichment is high in ribosome biosynthesis and the pentose phosphate pathway. The RB phase shows increased glycolysis and fatty acid biosynthesis regulation. The RC phase demonstrates a shift toward amino acid degradation and beta-oxidation. This visualization demonstrates how chromatin modifications coordinate gene expression to drive metabolic transitions during different cellular respiratory states.

This medical pathophysiology diagram illustrates the functional enrichment of core metabolic pathways regulated by specific histone modifications across the three phases of the Yeast Metabolic Cycle (YMC): Oxidative (OX), Respiration Burst (RB), and Respiration Control (RC). Three cellular models depict pathways including the Pentose Phosphate Pathway, Glycolysis, 1C-metabolism, TCA cycle, Fatty acid biosynthesis, and Beta-oxidation, connecting the cytosol to the mitochondria and cell membrane. Color-coded horizontal bars overlying specific pathways indicate enrichment by specific epigenetic marks: H3K9ac (red), H3K18ac (green), H3K56ac (yellow), H3K14ac (purple), H4K5ac (orange), and H3K4me3 (blue). In the OX phase, enrichment is high in ribosome biosynthesis and the pentose phosphate pathway. The RB phase shows increased glycolysis and fatty acid biosynthesis regulation. The RC phase demonstrates a shift toward amino acid degradation and beta-oxidation. This visualization demonstrates how chromatin modifications coordinate gene expression to drive metabolic transitions during different cellular respiratory states.

A pathophysiology diagram illustrating the metabolic pathways leading to cell death in response to glucose starvation or blockade of glucose uptake, stratified by SLC7A11 expression levels. The schematic is divided into two vertical panels. The left panel shows SLC7A11-low cells, where reduced glycolysis and pentose phosphate pathway (PPP) activity lead to mitochondrial dysfunction (TCA cycle inhibition, Bak/Bax activation, and cytochrome c release), resulting in Caspase-3 activation, PARP cleavage, membrane blebbing, and classical apoptosis. The right panel shows SLC7A11-high cells, characterized by high cystine uptake. In the absence of glucose-derived NADPH, cystine reduction causes disulfide stress, which triggers the Rac-WRC-Arp2/3 signaling pathway. This leads to aberrant disulfide bonding in cytoskeleton proteins and a distinct form of regulated cell death known as disulfidptosis, depicted by cell shrinkage. Key molecules identified include hexokinase (HK), G6P, pyruvate, NADPH, and Cyto c. The diagram uses color-coded circles and flow arrows to differentiate metabolic intermediates from regulatory signaling complexes and final cellular outcomes.

A pathophysiology diagram illustrating the metabolic pathways leading to cell death in response to glucose starvation or blockade of glucose uptake, stratified by SLC7A11 expression levels. The schematic is divided into two vertical panels. The left panel shows SLC7A11-low cells, where reduced glycolysis and pentose phosphate pathway (PPP) activity lead to mitochondrial dysfunction (TCA cycle inhibition, Bak/Bax activation, and cytochrome c release), resulting in Caspase-3 activation, PARP cleavage, membrane blebbing, and classical apoptosis. The right panel shows SLC7A11-high cells, characterized by high cystine uptake. In the absence of glucose-derived NADPH, cystine reduction causes disulfide stress, which triggers the Rac-WRC-Arp2/3 signaling pathway. This leads to aberrant disulfide bonding in cytoskeleton proteins and a distinct form of regulated cell death known as disulfidptosis, depicted by cell shrinkage. Key molecules identified include hexokinase (HK), G6P, pyruvate, NADPH, and Cyto c. The diagram uses color-coded circles and flow arrows to differentiate metabolic intermediates from regulatory signaling complexes and final cellular outcomes.

This medical illustration comprises two panels detailing thiamine (Vitamin B1) metabolism. Panel A depicts the de novo thiamine biosynthesis pathway and transport mechanism. It shows the convergence of the thiamine pyrimidine part (from HMP and PLP via THI20 and THI5) and the thiamine thiazole part (from HET and NAD+ via THI6 and THI4). Intermediates include HMP-PP and HET-P, which fuse via THI6 to form thiamine phosphate (ThP). Extracellular thiamine uptake involves PHO3 and the THI7 transporter, culminating in the synthesis of the active cofactor, thiamine pyrophosphate (ThPP), by THI80. Panel B is a metabolic map showing the subcellular localization of ThPP-dependent reactions in the cytosol and mitochondria. Key essential enzymes requiring ThPP as a cofactor are highlighted in blue, including transketolase (Pentose Phosphate pathway), pyruvate decarboxylase (fermentation), and mitochondrial complexes: pyruvate dehydrogenase, alpha-ketoglutarate dehydrogenase (TCA cycle), and branched-chain alpha-keto acid dehydrogenase. The diagram illustrates how thiamine deficiency would disrupt central energy metabolism and carbohydrate processing.

This medical illustration comprises two panels detailing thiamine (Vitamin B1) metabolism. Panel A depicts the de novo thiamine biosynthesis pathway and transport mechanism. It shows the convergence of the thiamine pyrimidine part (from HMP and PLP via THI20 and THI5) and the thiamine thiazole part (from HET and NAD+ via THI6 and THI4). Intermediates include HMP-PP and HET-P, which fuse via THI6 to form thiamine phosphate (ThP). Extracellular thiamine uptake involves PHO3 and the THI7 transporter, culminating in the synthesis of the active cofactor, thiamine pyrophosphate (ThPP), by THI80. Panel B is a metabolic map showing the subcellular localization of ThPP-dependent reactions in the cytosol and mitochondria. Key essential enzymes requiring ThPP as a cofactor are highlighted in blue, including transketolase (Pentose Phosphate pathway), pyruvate decarboxylase (fermentation), and mitochondrial complexes: pyruvate dehydrogenase, alpha-ketoglutarate dehydrogenase (TCA cycle), and branched-chain alpha-keto acid dehydrogenase. The diagram illustrates how thiamine deficiency would disrupt central energy metabolism and carbohydrate processing.

This pathophysiology diagram illustrates the metabolic signaling pathways regulating monocyte-to-endothelial cell differentiation and endothelial cell sprouting (angiogenesis). The visual is divided into three key regulatory branches. 1) ROS-Induced Differentiation: Reactive oxygen species (ROS) promote the differentiation of monocytes into endothelial cells by upregulating glycolysis, amino acid metabolism, and fatty acid recycling (degradation and synthesis) for energy and biomass supply. 2) ROS-Induced Proliferation: In mature endothelial cells, ROS stimulate sprouting and proliferation through glucose recycling (gluconeogenesis, pyruvate metabolism, and the glucose-alanine cycle), which feeds the pentose phosphate pathway (PPP) and purine/pyrimidine synthesis. 3) Inhibition Pathways: Cysteine inhibits monocyte differentiation and endothelial proliferation by diverting glycine from one-carbon metabolism toward fatty acid synthesis and glutathione metabolism for oxidative stress control. Propranolol blocks endothelial sprouting and proliferation by inducing an impairment of cell metabolism (decreasing purine/pyrimidine, cysteine, one-carbon, glutathione, and nicotinamide metabolism), ultimately leading to cell quiescence. The diagram uses up/down arrows and colored flow blocks to highlight how metabolic rewiring determines vascular cell fate.

This pathophysiology diagram illustrates the metabolic signaling pathways regulating monocyte-to-endothelial cell differentiation and endothelial cell sprouting (angiogenesis). The visual is divided into three key regulatory branches. 1) ROS-Induced Differentiation: Reactive oxygen species (ROS) promote the differentiation of monocytes into endothelial cells by upregulating glycolysis, amino acid metabolism, and fatty acid recycling (degradation and synthesis) for energy and biomass supply. 2) ROS-Induced Proliferation: In mature endothelial cells, ROS stimulate sprouting and proliferation through glucose recycling (gluconeogenesis, pyruvate metabolism, and the glucose-alanine cycle), which feeds the pentose phosphate pathway (PPP) and purine/pyrimidine synthesis. 3) Inhibition Pathways: Cysteine inhibits monocyte differentiation and endothelial proliferation by diverting glycine from one-carbon metabolism toward fatty acid synthesis and glutathione metabolism for oxidative stress control. Propranolol blocks endothelial sprouting and proliferation by inducing an impairment of cell metabolism (decreasing purine/pyrimidine, cysteine, one-carbon, glutathione, and nicotinamide metabolism), ultimately leading to cell quiescence. The diagram uses up/down arrows and colored flow blocks to highlight how metabolic rewiring determines vascular cell fate.

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HMP Shunt (Hexose Monophosphate Shunt / Pentose Phosphate Pathway)

The HMP shunt is an alternative pathway for glucose-6-phosphate metabolism that runs parallel to glycolysis. It occurs entirely in the cytosol, does not produce or consume ATP, and has two main products: NADPH and ribose-5-phosphate.

Overview Diagram (Harper's Biochemistry)

HMP Shunt full cycle - Harper's Biochemistry

The Two Phases

Phase 1 - Irreversible Oxidative Phase

This phase generates NADPH and converts glucose-6-phosphate to a pentose sugar.
StepSubstrateEnzymeProductCofactor
1Glucose-6-phosphateGlucose-6-phosphate dehydrogenase (G6PD)6-PhosphogluconolactoneNADP+ → NADPH
26-PhosphogluconolactoneGluconolactone hydrolase6-Phosphogluconate-
36-Phosphogluconate6-Phosphogluconate dehydrogenaseRibulose-5-phosphate + CO2NADP+ → NADPH
  • Net: 1 Glucose-6-phosphate → 1 Ribulose-5-phosphate + 1 CO2 + 2 NADPH
  • Step 1 (G6PD) is the rate-limiting, committed, regulated step
  • G6PD is inhibited by NADPH (product inhibition) and induced by insulin

Phase 2 - Reversible Non-oxidative Phase

Ribulose-5-phosphate can be directed in two ways depending on cell needs:

Route A - Cell needs ribose-5-phosphate (for nucleotide synthesis)

Ribulose-5-phosphate → Ribose-5-phosphate (via ribose-5-phosphate isomerase)

Route B - Cell needs more NADPH than ribose-5-phosphate (recycling back to glycolysis)

The non-oxidative reactions use transketolase (requires TPP/thiamine) and transaldolase to shuffle carbon units:
Starting with 3 x Ribulose-5-phosphate (C5):
  1. Ribulose-5-P → Xylulose-5-P (by phosphopentose epimerase) x2
  2. Ribulose-5-P → Ribose-5-P (by ribose-5-P isomerase) x1
Transketolase reaction 1 (transfers 2C unit):
Xylulose-5-P (C5) + Ribose-5-P (C5) → Sedoheptulose-7-P (C7) + Glyceraldehyde-3-P (C3)
Transaldolase reaction (transfers 3C unit):
Sedoheptulose-7-P (C7) + Glyceraldehyde-3-P (C3) → Fructose-6-P (C6) + Erythrose-4-P (C4)
Transketolase reaction 2 (transfers 2C unit):
Xylulose-5-P (C5) + Erythrose-4-P (C4) → Fructose-6-P (C6) + Glyceraldehyde-3-P (C3)
Fructose-6-P and Glyceraldehyde-3-P then re-enter glycolysis.

The Complete Cycle Summary

When the cycle runs fully (3 glucose-6-phosphates enter):
3 Glucose-6-P + 6 NADP+ + 3 H2O → 3 CO2 + 6 NADPH + 2 Fructose-6-P + 1 Glyceraldehyde-3-P
If continued, glucose can be completely oxidized to CO2 and water:
C6H12O6 + 12 NADP+ + 6 H2O → 6 CO2 + 12 NADPH

Key Enzymes Summary

EnzymePhaseCofactorNotes
G6PDOxidativeNADP+Rate-limiting; X-linked; inhibited by NADPH
Gluconolactone hydrolaseOxidative-Spontaneous + enzymatic
6-Phosphogluconate dehydrogenaseOxidativeNADP+Oxidative decarboxylation
Ribose-5-P isomeraseNon-oxidative-Makes ribose-5-P
Phosphopentose epimeraseNon-oxidative-Makes xylulose-5-P
TransketolaseNon-oxidativeTPP (thiamine)Transfers 2C units; used to assess thiamine status
TransaldolaseNon-oxidative-Transfers 3C units

Functions and Clinical Relevance

FunctionDetails
NADPH generationFatty acid synthesis (liver, adipose, mammary gland), steroid synthesis (adrenal cortex, gonads), glutathione reduction in RBCs
Ribose-5-phosphateNucleotide and nucleic acid synthesis (all dividing cells)
Antioxidant defenseNADPH keeps glutathione reduced; protects RBCs from oxidative hemolysis

G6PD Deficiency

  • X-linked recessive
  • RBCs cannot make enough NADPH → glutathione cannot be regenerated → oxidative stress → hemolytic anemia
  • Triggered by: primaquine, dapsone, fava beans, infections
  • Common in malaria-endemic regions (provides some protection against Plasmodium)

Transketolase as a Thiamine Marker

  • Transketolase requires thiamine pyrophosphate (TPP)
  • Low transketolase activity stimulated by added TPP = thiamine (B1) deficiency (beriberi, Wernicke's)

Sources: Lippincott Illustrated Reviews: Biochemistry 8e, Ch. 13; Harper's Illustrated Biochemistry 32e, Ch. 20; Basic Medical Biochemistry 6e, Ch. 27
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