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“ behave like an expert pathologist from now on and explain me the following topics according to 10 marks MBBS 2 year pathology under the following headings: Definition, etiology, pathogenesis, gross and microscopy. Keep it little easy for quick grasping as well”

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🔬 PATHOLOGY IMPORTANT TOPICS - MBBS 2nd Year

Expert Pathologist Notes | 10-Mark Format

Each topic: Definition → Etiology → Pathogenesis → Gross → Microscopy


PART 1: GENERAL PATHOLOGY


1. ACUTE INFLAMMATION

Definition

A rapid, short-lived (hours to days) vascular and cellular response of living tissues to injury, characterized by exudation of fluid and migration of leukocytes (mainly neutrophils) to the site of injury.

Etiology

  • Microbial infections (bacteria, viruses, fungi)
  • Physical agents: burns, radiation, trauma
  • Chemical agents: acids, alkalis, toxins
  • Tissue necrosis (ischemia)
  • Foreign bodies
  • Immune reactions

Pathogenesis

Cardinal signs: Rubor (redness), Calor (heat), Tumor (swelling), Dolor (pain), Functio laesa (loss of function)
Step 1 - Vascular changes:
  • Brief vasoconstriction (seconds) → vasodilation (arterioles, capillaries) → increased permeability
  • Slowing of blood flow → stasis
Step 2 - Cellular events (PAVEMENTING → EMIGRATION):
  • Margination - WBCs move to vessel periphery
  • Rolling - WBCs roll along endothelium (via Selectins: P & E selectin)
  • Adhesion - firm attachment (via Integrins + ICAM-1)
  • Transmigration/Diapedesis - WBCs cross endothelium (CD31/PECAM)
  • Chemotaxis - directed movement toward injury (C5a, LTB4, IL-8, bacterial products)
  • Phagocytosis - engulfment and killing
Chemical mediators:
MediatorSourceAction
HistamineMast cellsVasodilation, ↑ permeability
PGE2, PGI2Arachidonic acidVasodilation, pain, fever
LTB4AA pathwayChemotaxis
C3a, C5aComplementVasodilation, chemotaxis
IL-1, TNFMacrophagesFever, systemic effects
PAFMast cellsPlatelet activation, ↑ permeability

Gross Appearance

  • Affected tissue: red, hot, swollen, painful
  • Serous exudate (thin, watery) - skin blister
  • Fibrinous exudate - thick, yellow (lobar pneumonia)
  • Purulent/pus (suppurative) - abscess formation

Microscopy

  • Dilated congested blood vessels
  • Neutrophil infiltration (hallmark of acute inflammation) in early phase
  • Edema fluid in interstitium
  • Fibrin strands in exudate
  • Necrotic debris if severe
  • Later: monocytes replace neutrophils

2. CHRONIC INFLAMMATION

Definition

Inflammation of prolonged duration (weeks to months) in which active inflammation, tissue destruction, and attempts at repair are proceeding simultaneously. Hallmark cell: Lymphocytes and Macrophages.

Etiology

  1. Persistent infections (TB, syphilis, fungi, parasites)
  2. Prolonged exposure to toxic agents (silica - silicosis, asbestos)
  3. Autoimmune diseases (RA, SLE)
  4. Follows unresolved acute inflammation

Pathogenesis

  • Macrophage activation is central (M1 = classically activated - destroy; M2 = alternatively activated - repair)
  • Macrophages release: IL-1, TNF-α, IL-6, ROS, proteases → tissue destruction
  • T-helper cells (Th1) release IFN-γ → activate macrophages
  • Fibroblast proliferation → fibrosis and scarring
  • Neovascularization (angiogenesis)
  • Tissue remodeling with MMPs (matrix metalloproteinases)

Gross Appearance

  • Thickened, indurated tissue
  • Scarring and fibrosis
  • Loss of normal architecture
  • Organ may be shrunken (e.g., cirrhotic liver, contracted kidney)

Microscopy

  • Mononuclear cell infiltrate: Lymphocytes + Macrophages + Plasma cells (key feature)
  • Tissue destruction
  • Fibrosis (collagen deposition)
  • Angiogenesis (new vessel formation)
  • No prominent neutrophils (unlike acute)
  • Epithelioid cells if granulomatous

3. GRANULOMATOUS INFLAMMATION

Definition

A specialized form of chronic inflammation characterized by aggregates of activated macrophages (epithelioid cells), often with multinucleated giant cells, lymphocytes, and plasma cells.

Etiology

Infective:
  • Tuberculosis (M. tuberculosis) - MOST IMPORTANT
  • Leprosy (M. leprae)
  • Syphilis (T. pallidum)
  • Histoplasmosis, Cryptococcosis
Non-infective:
  • Sarcoidosis (non-caseating granulomas)
  • Crohn's disease
  • Foreign body (suture, silica, talc)
  • Berylliosis

Pathogenesis

  • Antigen not easily degradable → persistent macrophage activation
  • Th1 cells release IFN-γ → macrophages transform into epithelioid cells (large, pale, polygonal)
  • Epithelioid cells fuse → Multinucleated Giant cells
  • Types of giant cells:
    • Langhans type - nuclei arranged at periphery in horseshoe pattern (TB)
    • Foreign body type - nuclei randomly scattered
    • Touton giant cells - ring of nuclei, foamy cytoplasm (xanthomas)
  • Central caseous necrosis (in TB) surrounded by epithelioid cells + Langhans giant cells + lymphocytes + fibrosis

Gross Appearance

  • TB granuloma (tubercle): Soft, cheese-like center (caseous necrosis), grey-white nodule 1-2mm
  • Sarcoidosis: Hard, non-caseating nodules
  • Calcified old granulomas appear as calcium deposits

Microscopy

TB Granuloma - MUST KNOW:
  • Central caseous necrosis (pink, granular, acellular)
  • Surrounding epithelioid cells (large pale cells with "footprint-shaped" nuclei)
  • Langhans giant cells (nuclei at periphery in horseshoe)
  • Peripheral rim of lymphocytes
  • Outer zone of fibroblasts and collagen
Sarcoidosis: Same but NO caseous necrosis - "naked granuloma"

4. NECROSIS

Definition

Necrosis is the sum of morphological changes that follow cell death in a living tissue, resulting from the progressive degradative action of enzymes on the lethally injured cell.

Etiology

  • Ischemia/infarction (most common)
  • Toxins (chemicals, drugs)
  • Physical agents (heat, cold, radiation)
  • Infections (bacterial toxins, viruses)
  • Immune-mediated injury
  • Nutritional deficiency

Pathogenesis

Irreversible cell injury → cell death:
  • ATP depletion → Na/K pump failure → cell swelling
  • Intracellular Ca²⁺ rises → activates: phospholipases, proteases, endonucleases, ATPases
  • Mitochondrial dysfunction → free radical production
  • Cell membrane damage → lysosomal enzyme release
  • DNA fragmentation
Two enzyme systems degrade dead cells:
  1. Autolysis - own lysosomal enzymes
  2. Heterolysis - leukocyte enzymes

Types of Necrosis (Gross + Microscopy)

TypeLocationGrossMicroscopy
CoagulativeHeart, kidney, spleenFirm, pale, preserved outlineGhost cells - outlines preserved, no nuclei
LiquefactiveBrain, abscessSoft, liquid, cysticComplete dissolution, debris + neutrophils
CaseousTB, fungalSoft, cheese-like, whiteGranular pink debris, NO cell outlines
Fat necrosisPancreas, breastChalky white deposits (saponification)Fat cells with calcium soap deposits
FibrinoidBlood vessel wallsNot grossly visibleBright pink, fibrin-like material in walls
GangrenousLimbsDry/wet/gas gangreneCoagulative + putrefaction

Key Microscopic Features (Necrosis vs Apoptosis)

FeatureNecrosisApoptosis
Cell sizeSwollenShrunken
NucleusPyknosis → karyorrhexis → karyolysisFragmented, condensed
InflammationYESNO
MembraneDisruptedIntact (blebs)
TriggerPathologicalPhysiological or pathological

5. APOPTOSIS

Definition

Apoptosis is programmed cell death - an active, energy-dependent, genetically regulated process of cell deletion that maintains tissue homeostasis. No inflammation occurs.

Etiology

Physiological:
  • Embryogenesis (finger formation, organ development)
  • Hormone withdrawal (endometrial shedding, involution of lactating breast)
  • Immune regulation (deletion of autoreactive T cells)
  • Cell turnover in epithelium
Pathological:
  • Viral infections (HIV, hepatitis - Councilman bodies in liver)
  • DNA damage beyond repair
  • Cytotoxic T-cell killing
  • Radiation, cytotoxic drugs

Pathogenesis

Two pathways:
1. Intrinsic (Mitochondrial) Pathway:
  • DNA damage / Growth factor withdrawal → Pro-apoptotic proteins (Bax, Bak) activated
  • Mitochondria releases Cytochrome C
  • Cytochrome C + APAF-1 → Apoptosome → activates Caspase 9 → Caspase 3
  • Anti-apoptotic: BCL-2 (blocks this pathway)
2. Extrinsic (Death Receptor) Pathway:
  • Fas ligand binds Fas (CD95) receptor
  • TNF binds TNF-R1
  • Activates Caspase 8 → Caspase 3
  • Caspase 3 = executioner caspase
Execution phase:
  • Nuclear chromatin condensation
  • DNA fragmentation (ladder pattern on gel - 180bp)
  • Cell blebbing → apoptotic bodies

Gross Appearance

  • Not visible grossly (individual cell death, no inflammation)

Microscopy

  • Cell shrinkage
  • Dense nuclear chromatin condensation (pyknosis)
  • Cytoplasmic eosinophilia
  • Formation of apoptotic bodies (membrane-bound fragments)
  • Engulfed by neighboring cells or macrophages (efferocytosis)
  • NO inflammatory reaction
  • Special stain: TUNEL assay detects fragmented DNA

6. CELLULAR ADAPTATIONS

Definition

Cellular adaptations are reversible changes in the size, number, phenotype, metabolic activity, or functions of cells in response to changes in their environment (stress or abnormal stimulation).

Etiology/Types

1. ATROPHY - decrease in cell/organ size
  • Causes: Disuse, denervation, inadequate nutrition, loss of blood supply, loss of endocrine stimulation, aging
  • Gross: Organ smaller than normal
  • Micro: Smaller cells, lipofuscin pigment accumulates ("wear and tear" pigment)
2. HYPERTROPHY - increase in cell SIZE (not number)
  • Causes: Increased workload (cardiac hypertrophy), hormonal (uterus in pregnancy), compensatory
  • Gross: Organ enlarged, walls thickened (e.g., heart in hypertension)
  • Micro: Cells larger, nuclei larger, more organelles
3. HYPERPLASIA - increase in cell NUMBER
  • Causes: Hormonal (endometrial hyperplasia in estrogen excess), compensatory (liver regeneration), chronic irritation
  • Gross: Organ enlarged, uniform
  • Micro: Increased cells per unit area, architecturally normal
4. METAPLASIA - replacement of one differentiated cell type by another
  • Causes: Chronic irritation/injury
  • Examples:
    • Squamous metaplasia: Respiratory tract (smoking), endocervix (chronic cervicitis), bladder (stones)
    • Columnar metaplasia: Barrett esophagus (GERD - squamous → columnar)
    • Osseous metaplasia: Myositis ossificans
  • Micro: Normal cells replaced by different cell type; architecture preserved
5. DYSPLASIA - disordered cell growth, premalignant
  • Causes: Chronic irritation, carcinogens, HPV
  • Micro: Loss of polarity, nuclear pleomorphism, increased mitoses, abnormal maturation
  • NOT a true adaptation - potential precursor to carcinoma

Pathogenesis

  • Each adaptation is driven by altered gene expression in response to stress
  • Reversible if stimulus removed (except dysplasia which may progress)

7. EDEMA

Definition

Edema is the accumulation of excess fluid in the interstitial tissue spaces or body cavities.
  • Exudate: inflammatory, protein-rich, SG >1.020
  • Transudate: non-inflammatory, protein-poor, SG <1.012

Etiology & Pathogenesis

Starling forces govern fluid movement:
MechanismExamples
↑ Hydrostatic pressureCCF (cardiac failure), portal hypertension, venous obstruction
↓ Plasma oncotic pressureNephrotic syndrome, liver failure (↓albumin), malnutrition (Kwashiorkor)
↑ Vascular permeabilityInflammation, burns, anaphylaxis
Lymphatic obstructionFilariasis (elephantiasis), post-mastectomy, tumor invasion
Na⁺ & water retentionRenal failure, hyperaldosteronism
Cardiac edema: ↑ hydrostatic pressure + RAAS activation → pitting edema (legs, sacrum) Renal edema: Nephrotic - periorbital, generalized (anasarca) Cerebral edema: vasogenic (BBB breakdown) or cytotoxic (cell swelling)

Gross Appearance

  • Tissue appears pale, swollen, boggy
  • Pitting edema: pressure leaves indentation
  • Ascites: fluid in peritoneal cavity
  • Hydrothorax: pleural fluid
  • Pulmonary edema: lungs heavy, frothy fluid oozes on cut section

Microscopy

  • Pale, eosinophilic material in interstitial spaces
  • Widely spaced cells
  • Pulmonary edema: pink fluid in alveoli, dilated capillaries
  • Cerebral edema: pallor of white matter, vacuolation around vessels

8. SHOCK

Definition

Shock is a state of systemic hypoperfusion of tissues due to reduced cardiac output or reduced effective circulating blood volume, leading to cellular hypoxia and organ failure.

Etiology / Types

TypeCauseMechanism
HypovolemicHemorrhage, burns, dehydration↓ Blood volume
CardiogenicMI, cardiac tamponade, arrhythmia↓ Cardiac output
Distributive (Septic)Gram-negative sepsis (endotoxin)Vasodilation + ↑ permeability
NeurogenicSpinal cord injury, anesthesiaLoss of vasomotor tone
AnaphylacticAllergy (IgE mediated)Massive vasodilation + ↑ permeability

Pathogenesis

Three stages:
Stage 1: Compensated (Non-progressive):
  • Baroreceptor activation → SNS stimulation
  • Tachycardia, peripheral vasoconstriction, ↑ ADH, ↑ RAAS
  • Vital organs (heart, brain) perfused
  • Reversible
Stage 2: Progressive (Decompensated):
  • Compensatory mechanisms fail
  • Widespread ischemia → lactic acidosis
  • Acidosis → vasodilation → more hypotension
  • Endothelial injury → DIC
Stage 3: Irreversible:
  • Multiorgan failure (MOF)
  • Gut ischemia → bacterial translocation → sepsis
  • Death inevitable
Septic shock special features:
  • Endotoxin (LPS) → macrophage activation → TNF, IL-1, IL-6
  • Nitric oxide → massive vasodilation
  • Warm shock initially (bounding pulse), then cold shock

Gross Appearance

  • Organs: pale or congested
  • Liver: centrilobular necrosis ("nutmeg liver" in congestion)
  • Kidney: cortical pallor, tubular necrosis
  • Lungs: congestion, atelectasis, ARDS pattern
  • Adrenal: hemorrhagic (Waterhouse-Friderichsen in meningococcal sepsis)

Microscopy

  • Kidneys: Acute tubular necrosis (ATN) - tubular epithelial cell death, preserved basement membrane
  • Liver: Centrilobular necrosis, fatty change
  • Lungs: Hyaline membrane formation (ARDS)
  • Brain: Ischemic neuronal changes (red neurons)
  • Heart: Focal myocardial necrosis

9. WOUND HEALING

Definition

Wound healing is the process by which the body repairs injured tissue through a coordinated sequence of cellular and biochemical events.

Etiology (Factors affecting healing)

Local factors: Infection, poor blood supply, foreign body, radiation, wound dehiscence Systemic factors: Diabetes mellitus, malnutrition (Vit C deficiency → scurvy - defective collagen), steroids, immunosuppression, aging

Pathogenesis

Two types:
  • Primary intention (1° healing): Clean wound, edges apposed (surgical incision)
  • Secondary intention (2° healing): Open wound, large tissue loss, heals by granulation tissue
Phases of Wound Healing:
1. Hemostasis (0-few hours):
  • Platelet aggregation → plug
  • Clot formation (fibrin)
  • Platelets release: PDGF, TGF-β (initiate healing)
2. Inflammatory Phase (1-3 days):
  • Neutrophils clean bacteria and debris (first 24-48 hrs)
  • Macrophages arrive by day 3 (MOST IMPORTANT cell in healing)
  • Macrophages release: growth factors (PDGF, FGF, VEGF, TGF-β)
3. Proliferative Phase (3-21 days):
  • Granulation tissue forms (fibroblasts + new capillaries + macrophages)
  • Fibroblasts synthesize collagen (Type III first, then Type I)
  • Angiogenesis (VEGF driven)
  • Epithelialization (migration of keratinocytes across wound)
  • Myofibroblasts → wound contraction
4. Remodeling Phase (21 days - 1 year):
  • Type III collagen → Type I collagen
  • Tensile strength increases
  • Maximum tensile strength: 80% of normal (never 100%)

Gross Appearance

  • Primary intention: Narrow scar, hairline
  • Secondary intention: Wider scar, granulation tissue visible initially
  • Keloid: Scar extends beyond wound margins (excess collagen - common in dark skin)
  • Hypertrophic scar: Raised but within wound margins

Microscopy

Granulation tissue (key features):
  • Proliferating fibroblasts
  • New capillaries (thin-walled, plump endothelium)
  • Inflammatory cells (macrophages, neutrophils)
  • Loose extracellular matrix
  • Later: myofibroblasts, collagen deposition

10. AMYLOIDOSIS (Primary & Secondary)

Definition

Amyloidosis is a pathological condition characterized by extracellular deposition of insoluble abnormal fibrillar proteins (amyloid) in various tissues and organs, causing progressive tissue damage.

Etiology / Classification

TypeFibril ProteinAssociated Condition
AL (Primary)Immunoglobulin light chainsMultiple myeloma, plasma cell dyscrasia
AA (Secondary)Serum Amyloid A proteinChronic infections (TB, osteomyelitis), RA, IBD
Amyloid precursor proteinAlzheimer's disease
ATTRTransthyretinFamilial amyloidosis, Senile amyloidosis
Aβ₂Mβ₂-microglobulinLong-term hemodialysis

Pathogenesis

  • Misfolded proteins resist proteolysis and form β-pleated sheet configuration
  • Aggregation into fibrils → deposit in extracellular space
  • Serum Amyloid P (SAP) binds fibrils → protects from degradation
  • Progressive organ dysfunction:
    • Kidneys: ↓ filtration → nephrotic syndrome
    • Heart: restrictive cardiomyopathy
    • Liver: hepatomegaly
    • Nerves: peripheral neuropathy

Gross Appearance

  • Organ enlarged, pale
  • "Lardaceous" appearance (bacon-like, waxy, firm)
  • Sago spleen: amyloid in lymphoid follicles (small granules like sago seeds)
  • Lardaceous spleen: amyloid in sinusoids (diffuse waxy appearance)
  • Kidney: enlarged, pale, waxy

Microscopy

  • Amorphous eosinophilic extracellular material in H&E
  • Congo Red stain: Pink-orange color → Apple-green birefringence under polarized light (PATHOGNOMONIC)
  • Metachromasia with Crystal violet
  • Thioflavin T: Fluorescence
  • Distribution: Around blood vessels, glomerular mesangium, interstitium
  • Pressure atrophy of adjacent parenchymal cells

11. NEOPLASIA

Definition

Neoplasia (literally "new growth") is an abnormal mass of tissue whose growth exceeds and is uncoordinated with that of normal tissues and persists in the same excessive manner after cessation of the stimuli that evoked the change. (Willis, 1952)
Tumor = Neoplasm (benign or malignant)

Etiology (Carcinogenesis)

Chemical carcinogens:
  • Direct acting: Alkylating agents (nitrogen mustard)
  • Indirect (procarcinogens → activated by P450): Polycyclic hydrocarbons (benzpyrene in smoking), azo dyes, aflatoxins
Physical:
  • UV radiation → pyrimidine dimers → SCC, BCC, melanoma
  • Ionizing radiation → AML, thyroid carcinoma
Viral:
  • DNA viruses: HPV (CA cervix), HBV (HCC), EBV (Burkitt lymphoma, Hodgkin), KSHV (Kaposi sarcoma)
  • RNA viruses: HTLV-1 (Adult T-cell leukemia)
Genetic:
  • Inherited mutations: BRCA1/2 (breast/ovary), APC (colon), RB (retinoblastoma), p53 (Li-Fraumeni)

Pathogenesis (Molecular Basis of Carcinogenesis)

Four fundamental alterations:
1. Self-sufficiency in growth signals (Proto-oncogenes mutated → Oncogenes):
  • RAS mutations (30% of all cancers) - growth signal constantly ON
  • MYC amplification - transcription factor, promotes cell cycle
  • HER2/neu amplification (breast cancer)
2. Insensitivity to growth-inhibitory signals (Tumor Suppressor Genes lost):
  • RB gene (retinoblastoma) - gatekeeper of cell cycle (G1 checkpoint)
  • p53 (guardian of the genome) - mutated in 50% of all cancers; induces apoptosis on DNA damage
  • APC gene (colon cancer)
3. Evasion of apoptosis:
  • BCL-2 overexpression (Follicular lymphoma - t(14;18))
  • Loss of p53
4. Limitless replication potential:
  • Telomerase activation - allows indefinite division
5. Angiogenesis:
  • VEGF upregulation → tumor neovasculature
6. Invasion and metastasis:
  • Loss of E-cadherin → reduced cell adhesion
  • MMPs dissolve basement membrane
  • EMT (epithelial-mesenchymal transition)

Gross Appearance

Benign tumor:
  • Well-encapsulated, smooth borders
  • Soft or firm, homogeneous cut surface
  • No necrosis/hemorrhage usually
Malignant tumor:
  • Infiltrative, no capsule, irregular borders
  • Heterogeneous, areas of necrosis (central) and hemorrhage
  • Hard (scirrhous) in some (breast carcinoma)
  • Papillary/fungating/ulcerating surface

Microscopy

Benign:
  • Closely resembles parent tissue (well-differentiated)
  • Uniform cells, no pleomorphism
  • Rare/no mitoses
  • No invasion of capsule or vessels
  • Pushing (not infiltrating) borders
Malignant:
  • Nuclear pleomorphism (variation in size and shape)
  • Hyperchromatism (dark nuclei)
  • Increased nuclear:cytoplasmic ratio
  • Abnormal mitotic figures (tripolar, etc.)
  • Loss of polarity
  • Invasion of vessels and lymphatics
  • Necrosis
  • Tumor giant cells

12. THROMBOSIS & EMBOLISM

Thrombosis - Definition

A thrombus is an abnormal, solid mass formed from blood constituents in the cardiovascular system during life.

Virchow's Triad (Etiology)

  1. Endothelial injury - atherosclerosis, hypertension, trauma (most important)
  2. Abnormal blood flow - stasis (immobility, cardiac failure), turbulence (bifurcations)
  3. Hypercoagulability - factor V Leiden, antiphospholipid syndrome, OCP use, malignancy

Pathogenesis of Thrombus

  • Endothelial injury → von Willebrand factor exposed
  • Platelet adhesion → activation → aggregation (platelet plug)
  • Coagulation cascade activated → fibrin mesh
  • Arterial thrombus (white thrombus): Platelets + fibrin, at site of atherosclerosis
  • Venous thrombus (red thrombus/phlebothrombosis): RBCs trapped in fibrin mesh (stasis-related, e.g., DVT)
Fate of thrombus:
  1. Resolution - fibrinolysis, most common small thrombi
  2. Organization - fibroblasts invade, scar tissue
  3. Recanalization - new channels form through organized thrombus
  4. Propagation - grows bigger
  5. Embolization - breaks off → embolus

Gross Appearance

  • Arterial thrombus: Grey-white, laminated (Lines of Zahn - alternating platelet + RBC layers), adherent to wall
  • Venous thrombus (ante-mortem): Red-brown, coarsely layered, may have head (grey-white) and tail (red)
  • Post-mortem clot (chicken fat clot): Yellow top (plasma proteins) + red bottom (RBCs), NOT adherent, gelatinous

Microscopy

  • Lines of Zahn: Pale (platelet-fibrin) layers alternating with pink-red (RBC) layers
  • This distinguishes ante-mortem thrombus from post-mortem clot

Embolism - Definition

An embolus is any intravascular mass (solid, liquid, or gas) carried in blood and capable of lodging in a vessel too small to allow its passage, causing obstruction.

Types of Emboli

TypeOriginDestination
Pulmonary thromboembolismDVT (leg veins)Pulmonary artery
Systemic thromboembolismLeft heart, aortaBrain, limbs, kidney
Fat embolismBone fracture, liposuctionLung, brain
Air embolismIV lines, neck veinsLung
Amniotic fluid embolismChildbirthLung
Tumor embolismMalignant tumorVarious
Pulmonary embolism (PE):
  • Source: DVT (95%)
  • Saddle embolus: straddles bifurcation → sudden death
  • Smaller PE → pulmonary infarction (wedge-shaped, hemorrhagic)
Fat embolism syndrome:
  • After long bone fractures (femur)
  • Triad: respiratory failure + neurological symptoms + petechial rash
  • Micro: Fat globules in vessels

Gross (PE)

  • Saddle embolus: large, fills pulmonary artery bifurcation
  • Smaller emboli: wedge-shaped hemorrhagic infarcts at lung periphery

Microscopy

  • Fibrin-platelet material in vessels
  • Fat embolism: empty spaces (fat dissolved) or frozen section shows fat globules (Sudan stain)
  • Amniotic fluid embolism: squamous cells, mucin, lanugo hair in pulmonary vessels

13. CALCIFICATION (Dystrophic vs Metastatic)

Definition

Pathological calcification is the abnormal deposition of calcium salts in tissues.
FeatureDystrophicMetastatic
DefinitionCalcification in dead/dying tissueCalcification in normal tissue
Serum CalciumNORMALHIGH (hypercalcemia)
CausesOld TB granulomas, atherosclerotic plaques, dead parasites, necrotic tumors, psammoma bodiesHyperparathyroidism, Vit D excess, multiple myeloma, metastatic bone disease
LocationAnywhere dead tissue existsInterstitial tissues of kidney, lung, gastric mucosa, blood vessels
MechanismMembrane damage → Ca²⁺ influx; phosphatases released↑ Ca × P product → precipitation
Psammoma bodies (special): concentric laminar calcification in:
  • Papillary thyroid carcinoma
  • Papillary serous carcinoma of ovary
  • Meningioma
  • Mesothelioma (Mnemonic: PSaMMoMa = Papillary thyroid, Serous ovary, Meningioma, Mesothelioma)

Gross

  • Dystrophic: gritty, chalky white foci in necrotic tissue (e.g., calcified TB lymph node, "egg-shell calcification")
  • Metastatic: stone-hard, pale deposits throughout organ

Microscopy

  • Basophilic (blue) deposits in H&E
  • Fine granular or coarse clumps
  • Von Kossa stain: black
  • Alizarin red: red color

14. DYSPLASIA & CARCINOMA IN SITU

Dysplasia - Definition

Dysplasia is a loss of uniformity of individual cells and loss of architectural orientation of cells. It is a premalignant change but does not invade basement membrane.

Carcinoma In Situ (CIS)

CIS is when the full thickness of an epithelium shows dysplastic changes (all layers replaced by atypical cells) but the basement membrane is INTACT - no stromal invasion.

Etiology

  • Chronic irritation, chemical carcinogens
  • HPV (cervical dysplasia/CIN) - most important
  • Smoking (bronchial dysplasia)
  • Chronic gastritis (gastric dysplasia)

Pathogenesis

Normal → Mild dysplasia (CIN 1) → Moderate dysplasia (CIN 2) → Severe dysplasia/CIS (CIN 3) → Invasive carcinoma
  • Accumulation of genetic mutations with each step
  • Loss of p53, Rb function
  • HPV E6 (degrades p53), E7 (inactivates Rb)

Gross

  • Dysplasia: not visible grossly or appears as leukoplakia/erythroplakia
  • CIS: may show abnormal areas on colposcopy (acetowhite)

Microscopy

Dysplasia features:
  • Nuclear pleomorphism and hyperchromatism
  • Increased N:C ratio
  • Abnormal mitoses
  • Loss of cell polarity
  • Maturation disorder
  • Basement membrane INTACT
CIS: All above changes extend full thickness but basement membrane intact

PART 2: HEMATOLOGY / HEMATOPOIETIC PATHOLOGY


15. ANEMIAS - CLASSIFICATION & LAB DIAGNOSIS

Definition

Anemia is a condition in which the hemoglobin concentration is below the lower limit of normal for age and sex (Adult male <13 g/dL, Adult female <12 g/dL, Children <11 g/dL).

Classification

A. Morphological (MCV-based) - Most useful clinically:
TypeMCVMCHExample
Microcytic hypochromic<80 fL<27 pgIron deficiency, Thalassemia, Sideroblastic anemia
Normocytic normochromic80-100 fL27-32 pgAplastic anemia, Hemolytic anemia (acute), blood loss
Macrocytic (megaloblastic)>100 fL>32 pgB12/Folate deficiency
B. Etiological Classification:
  1. Blood loss: Acute or chronic hemorrhage
  2. Decreased production (hypoproliferative):
    • Nutritional deficiency: Iron, B12, Folate
    • Aplastic anemia (marrow failure)
    • Chronic disease (ACD)
    • Renal failure (↓ EPO)
  3. Increased destruction (hemolytic):
    • Intrinsic: G6PD deficiency, Sickle cell, Thalassemia, Hereditary spherocytosis
    • Extrinsic: Autoimmune hemolytic anemia, malaria, mechanical heart valves

Pathogenesis (Iron Deficiency Anemia - Most Common)

  • ↓ Iron → ↓ Heme synthesis → ↓ Hemoglobin → microcytic hypochromic RBCs
  • Stages: Iron store depletion → Iron deficient erythropoiesis → Iron deficiency anemia
  • Lab: ↓ Serum iron, ↑ TIBC, ↓ Ferritin, ↓ Serum ferritin

Gross

  • Pallor of skin, conjunctiva, palms
  • Koilonychia (spoon-shaped nails) in IDA
  • Glossitis, angular stomatitis

Microscopy (Peripheral smear)

IDA: Microcytic hypochromic RBCs, pencil cells, target cells, increased central pallor (>1/3 cell diameter) Megaloblastic: Macro-ovalocytes, hypersegmented neutrophils (>5 lobes) - PATHOGNOMONIC Hemolytic: Schistocytes, spherocytes, polychromasia, reticulocytosis Sickle cell: Sickle-shaped (crescent) cells, target cells

16. HYPERSENSITIVITY REACTIONS

Definition

Hypersensitivity reactions are exaggerated or inappropriate immune responses that cause tissue injury. They are classified by Gell and Coombs into 4 types.

Etiology & Types

Type I - Immediate/Anaphylactic:
  • Mechanism: IgE-mediated, mast cell degranulation
  • Examples: Anaphylaxis (penicillin), asthma (atopic), urticaria, hay fever, food allergy
  • Mediators: Histamine, leukotrienes (LTC4, LTD4), PGD2
  • Time: Seconds to minutes
Type II - Cytotoxic:
  • Mechanism: IgG/IgM against cell surface antigens → complement activation or ADCC
  • Examples: Hemolytic transfusion reaction, autoimmune hemolytic anemia, Goodpasture syndrome, myasthenia gravis (Ab against AchR), Rh incompatibility (hemolytic disease of newborn)
  • Time: Hours
Type III - Immune Complex (Serum Sickness type):
  • Mechanism: Antigen-antibody complexes deposited in tissues → complement activation → neutrophil recruitment → damage
  • Examples: SLE (anti-dsDNA), post-streptococcal glomerulonephritis, serum sickness, hypersensitivity pneumonitis (farmer's lung)
  • Time: Hours to days
Type IV - Delayed/Cell-mediated (DTH):
  • Mechanism: Sensitized T lymphocytes (Th1) → cytokines → tissue damage
  • Examples: Contact dermatitis (poison ivy, nickel), tuberculin test (Mantoux), organ transplant rejection, granulomatous inflammation (TB)
  • Time: 24-72 hours (hence "delayed")
  • No antibodies involved - purely cell mediated

Pathogenesis (Type I in detail)

Sensitization phase: Allergen → IgE production by B cells → IgE binds FcεRI on mast cells (sensitization)
Elicitation phase (second exposure): Allergen crosslinks IgE on mast cells → degranulation → histamine release + new synthesis of leukotrienes/prostaglandins
Early phase (0-30 min): Vasodilation, edema, smooth muscle spasm Late phase (2-8 hr): Eosinophil and basophil recruitment, tissue damage

Gross

  • Type I: Urticaria (wheals), laryngeal edema, bronchospasm
  • Type III: Vasculitis lesions (purpura), arthritis
  • Type IV: Papular rash with vesicles (contact dermatitis), skin induration (Mantoux)

Microscopy

  • Type I: Edema, vasodilation, eosinophil infiltrate in tissues
  • Type II: Cell lysis, complement deposits (C3b) on RBCs
  • Type III: Immune complex deposits in vessel walls, neutrophil infiltrate, fibrinoid necrosis
  • Type IV: Mononuclear cell (lymphocyte and macrophage) infiltrate, no antibodies, granulomas in some

17. MULTIPLE MYELOMA

Definition

Multiple myeloma is a malignant neoplasm of plasma cells (terminally differentiated B cells) that produce a monoclonal immunoglobulin (M protein), primarily affecting the bone marrow and causing lytic bone lesions.

Etiology

  • Age: >60 years, M>F
  • Risk factors: Radiation exposure, genetic factors, MGUS (precursor)
  • Most common: IgG (55%) > IgA > IgD

Pathogenesis

  • Malignant plasma cells proliferate in bone marrow
  • Produce M protein (monoclonal) detectable as M spike on serum protein electrophoresis (SPEP)
  • RANKL upregulation → osteoclast activation → lytic bone lesions (punched-out on X-ray)
  • ↓ Normal Ig → recurrent infections
  • Light chain (Bence-Jones protein) deposits in kidney → Myeloma kidney (cast nephropathy)
  • Bone marrow crowding → pancytopenia
CRAB criteria (diagnostic):
  • C - Calcium elevated (hypercalcemia)
  • R - Renal failure
  • A - Anemia
  • B - Bone lytic lesions

Gross

  • Bone: multiple punched-out (lytic) lesions on skull, vertebrae, ribs - "salt and pepper" skull on X-ray
  • Vertebral collapse → kyphosis
  • Kidney: enlarged, pale (amyloid or cast nephropathy)

Microscopy

  • Bone marrow biopsy: sheets of plasma cells >10% (often >30%)
  • Plasma cells: eccentrically placed nucleus, "clock-face" chromatin, abundant basophilic cytoplasm, perinuclear hof (clear zone = Golgi apparatus)
  • Flame cells: bright red cytoplasm (IgA myeloma)
  • Mott cells: cytoplasm filled with Russell bodies (Ig globules)
  • Rouleaux formation in peripheral smear (RBCs stack like coins due to ↑ proteins)

18. LEUKEMIAS

Definition

Leukemias are malignant neoplasms of hematopoietic stem cells or early progenitor cells characterized by accumulation of leukemic cells in bone marrow and blood, leading to bone marrow failure.

Classification

TypeAgeKey Features
ALL (Acute Lymphoblastic)Children (2-10 yrs)Lymphoblasts; t(12;21) most common; best prognosis
AML (Acute Myeloblastic)AdultsMyeloblasts; Auer rods; t(15;17) in M3 (APL)
CLL (Chronic Lymphocytic)>60 yrs, most common adult leukemiaSmall mature lymphocytes; smudge cells
CML (Chronic Myeloid)Middle-agedPhiladelphia chromosome t(9;22); BCR-ABL

Etiology

  • Radiation, benzene, alkylating agents
  • Down syndrome (21x risk of ALL)
  • Viruses: HTLV-1 (Adult T-cell leukemia)
  • Genetic: CML (Ph chromosome)

Pathogenesis

CML:
  • t(9;22) → BCR-ABL fusion protein → constitutively active tyrosine kinase → uncontrolled proliferation
  • Treatment: Imatinib (Gleevec) - targeted therapy, blocks BCR-ABL
AML:
  • Maturation arrest at myeloblast stage
  • Auer rods (red needle-like cytoplasmic inclusions) - PATHOGNOMONIC of AML

Gross

  • Pale, infiltrated bone marrow
  • Lymphadenopathy, splenomegaly, hepatomegaly
  • Meningeal involvement (ALL - CNS spread)

Microscopy

ALL: Lymphoblasts - large nucleus, scant cytoplasm, indistinct nucleoli, PAS positive AML: Myeloblasts with Auer rods (eosinophilic needle inclusions), myeloperoxidase positive CLL: Small mature lymphocytes, smudge/basket cells (fragile cells ruptured on smear) - HALLMARK CML: All stages of myeloid maturation, myelocytes predominate, ↓ LAP score (leukocyte alkaline phosphatase)

19. HODGKIN vs NON-HODGKIN LYMPHOMA

Hodgkin Lymphoma (HL)

Definition: A lymphoid neoplasm characterized by the presence of Reed-Sternberg (RS) cells in an appropriate cellular background.
Etiology:
  • EBV association (50% of cases)
  • Bimodal age: young adults (15-35) and elderly (>50)
RS Cell (Pathognomonic):
  • Large binucleated or multilobated cell
  • "Owl eye" nucleoli - large, eosinophilic, surrounded by clear halo
  • CD15+, CD30+ (tumor markers)
WHO Classification (Subtypes):
SubtypeRS CellsBackgroundPrognosis
Nodular sclerosis (most common)Lacunar RS cellsCollagen bands, lymphocytesGood
Mixed cellularityClassic RS cellsEosinophils, plasma cells, lymphocytesIntermediate
Lymphocyte richFew RS cellsMany lymphocytesBest
Lymphocyte depletedMany RS cellsFew lymphocytesWorst
Gross: Rubber, discrete enlarged lymph nodes; "fish flesh" cut surface
Microscopy: RS cells in background of lymphocytes, eosinophils, plasma cells, fibrosis

Non-Hodgkin Lymphoma (NHL)

Definition: A heterogeneous group of lymphoid malignancies (B-cell or T-cell) that do not contain RS cells.
Key differences from HL:
FeatureHodgkinNon-Hodgkin
SpreadContiguous (orderly)Non-contiguous (skips nodes)
RS cellsPresentAbsent
MediastinalCommonLess common
Extranodal involvementRareCommon
EBV associationYesSome
PrognosisGenerally betterVariable
Common NHL types:
  • Follicular lymphoma: t(14;18), BCL-2 overexpression, indolent
  • Diffuse large B-cell (DLBCL): Most common aggressive NHL
  • Burkitt lymphoma: t(8;14), c-MYC translocation, "starry sky" pattern (EBV+, jaw mass in African children)
  • Mantle cell lymphoma: t(11;14), Cyclin D1, aggressive
Microscopy (NHL): Monotonous proliferation of lymphoid cells, loss of normal architecture, neoplastic cells in follicular or diffuse pattern

20. PLATELET DISORDERS

Definition

Platelet disorders are conditions characterized by abnormalities in platelet number or function, leading to bleeding tendencies (especially mucosal bleeding, petechiae, purpura).

Classification

A. Thrombocytopenia (↓ platelets <150,000/µL):
MechanismExamples
↓ ProductionAplastic anemia, marrow infiltration (leukemia), B12/folate deficiency
↑ Destruction (immune)ITP (Immune Thrombocytopenic Purpura) - autoantibodies (IgG) against GPIIb/IIIa
↑ Destruction (non-immune)TTP (Thrombotic Thrombocytopenic Purpura), DIC, HUS
SequestrationHypersplenism
ITP - Key Points:
  • Acute ITP: children, post-viral, self-limiting
  • Chronic ITP: adults, especially women; antiplatelet antibodies
  • Mega-karyocytes normal or increased in marrow (increased production to compensate)
  • Treatment: Steroids, IVIG, splenectomy
B. Thrombocytosis (↑ platelets):
  • Reactive (infection, post-splenectomy, iron deficiency)
  • Neoplastic (essential thrombocythemia)
C. Platelet Dysfunction:
  • Glanzmann thrombasthenia (deficient GPIIb/IIIa)
  • Bernard-Soulier syndrome (deficient GPIb - can't bind vWF)
  • Storage pool disease

Gross

  • Petechiae (pin-point hemorrhages <3mm) - skin, mucosae
  • Purpura (3-10mm)
  • Ecchymoses (>10mm bruises)

Microscopy

  • Peripheral smear: decreased or absent platelets
  • Bone marrow biopsy (ITP): normal/increased megakaryocytes
  • DIC/TTP: schistocytes (fragmented RBCs) due to microangiopathic hemolytic anemia

21. HAEMOPHILIA

Definition

Haemophilias are X-linked recessive coagulation disorders caused by deficiency of specific clotting factors, characterized by prolonged bleeding after trauma.

Types

FeatureHaemophilia AHaemophilia B
Factor deficientFactor VIIIFactor IX
GeneX chromosome (Xq28)X chromosome (Xq27)
Other nameClassic haemophiliaChristmas disease
Frequency80% of haemophilias15-20%

Etiology

  • X-linked recessive: males affected, females carriers
  • 30% cases: new mutations (no family history)
  • vWD (von Willebrand disease): most common inherited bleeding disorder (deficiency of vWF - needed for platelet adhesion AND Factor VIII carrier)

Pathogenesis

  • Factor VIII/IX are part of intrinsic pathway → activates Factor X → common pathway → thrombin → fibrin
  • Deficiency → clot cannot form properly → bleeding into joints (hemarthrosis), muscles, prolonged after minor cuts
Lab findings:
  • Prolonged aPTT (intrinsic pathway test)
  • Normal PT (extrinsic pathway intact)
  • Normal bleeding time (platelets normal)
  • ↓ Factor VIII or IX assay (confirmatory)

Gross

  • Hemarthrosis: swollen, tender joint (knee most common)
  • Hematoma in muscles
  • Hematuria
  • Intracranial hemorrhage (serious)

Microscopy

  • Joints: hemosiderin deposition, synovial hyperplasia, cartilage erosion
  • "Rusty" brown deposits from repeated bleeds

PART 3: SYSTEMIC PATHOLOGY - CARDIOVASCULAR & RESPIRATORY


22. ATHEROSCLEROSIS

Definition

Atherosclerosis is a chronic inflammatory disease of large and medium-sized arteries characterized by intimal thickening due to accumulation of lipids, cells, and matrix (atherosclerotic plaque/atheromas).

Etiology (Risk Factors)

Non-modifiable: Age, male sex, family history Modifiable: Hyperlipidemia (LDL↑ most important), hypertension, smoking, diabetes mellitus, obesity

Pathogenesis (Response to Injury Hypothesis)

  1. Endothelial injury → increased permeability, leukocyte adhesion
  2. Monocyte adhesion and migration into intima → transform to macrophages
  3. Macrophages take up oxidized LDL via scavenger receptors → become foam cells
  4. Fatty streak (earliest lesion) forms
  5. Smooth muscle migration from media → intima
  6. Smooth muscle proliferation + collagen synthesis → fibrous plaque
  7. Plaque grows → narrowing of lumen → ischemia
  8. Plaque rupture → thrombosis → MI, stroke

Gross Appearance

Stages:
  • Fatty streak: Flat, yellow, intimal streaks in aorta (earliest; seen in children)
  • Fibrous plaque (raised atheromatous plaque): Pearly white, raised, hard, protruding into lumen
  • Complicated plaque: Ulceration, calcification, hemorrhage into plaque, thrombosis
Most common site: Aorta > Coronary arteries > Carotid arteries

Microscopy

  • Foam cells (macrophages + lipid) - key feature of early lesion
  • Fibrous cap: smooth muscle cells + collagen
  • Necrotic core: lipid, cholesterol clefts, dead foam cells, calcium
  • Cholesterol clefts (clear spaces where cholesterol crystals dissolved in processing)
  • Inflammatory cells at periphery: lymphocytes, macrophages

23. MYOCARDIAL INFARCTION (MI)

Definition

MI is coagulative necrosis of myocardium due to prolonged ischemia (usually >20-40 minutes), most commonly from acute coronary artery occlusion by thrombus at site of ruptured atherosclerotic plaque.

Etiology

  • Coronary artery thrombosis (90%) - from ruptured atherosclerotic plaque
  • STEMI: Complete occlusion of coronary artery
  • NSTEMI: Partial occlusion
  • LAD (left anterior descending) = most commonly occluded ("widow maker")

Pathogenesis

  • Plaque rupture/fissure → platelet aggregation → thrombus → occlusion
  • Ischemia: reversible for first 20-40 min; irreversible beyond
  • Energy failure (ATP depletion) → cell swelling → membrane damage → necrosis
  • Wavefront phenomenon: Subendocardium (most vulnerable, poorest perfusion) → transmural
Enzyme markers (Serology):
MarkerRisesPeaksReturns to normal
Troponin I/T (most sensitive)3-4 hrs24-48 hrs7-10 days
CK-MB4-8 hrs18-24 hrs2-3 days
LDH24-48 hrs3-6 days8-14 days

Gross Appearance (Time-based changes)

TimeGross Finding
0-6 hrsNo visible change
6-12 hrsPale area (pallor)
18-24 hrsPale, yellow-grey area
3-7 daysYellow-grey, soft, mushy center (liquefaction) - MAX RISK OF RUPTURE
1-3 weeksRed-brown (granulation tissue) around yellow center
2+ monthsWhite, firm scar (fibrosis)
Complications:
  • Arrhythmias (1st day - most common cause of death)
  • Cardiogenic shock
  • Pericarditis (fibrinous) - day 3-5
  • Rupture (days 5-7) → tamponade/hemopericardium
  • Ventricular aneurysm
  • Mural thrombus → embolism
  • Dressler syndrome (autoimmune pericarditis) - weeks later

Microscopy

TimeMicroscopy
0-6 hrsNo change (or waviness of fibers)
6-24 hrsCoagulative necrosis: ghost cells (cytoplasm pink, no nuclei), hypereosinophilia
24-72 hrsNeutrophil infiltration
3-7 daysMacrophage infiltration, start of granulation tissue
1-3 weeksGranulation tissue (fibroblasts + capillaries)
>2 monthsDense fibrous scar (collagen), acellular

24. RHEUMATIC FEVER & RHEUMATIC HEART DISEASE

Definition

Rheumatic fever is an acute, immunologically mediated inflammatory condition that follows Group A beta-hemolytic Streptococcal (GABHS) pharyngitis, affecting the heart, joints, skin, and CNS.

Etiology

  • Group A Streptococcus (S. pyogenes) pharyngitis → triggers immune response
  • Molecular mimicry: Streptococcal M protein antigens share epitopes with cardiac proteins (myosin, tropomyosin)
  • Antibodies attack heart tissue → Rheumatic heart disease (RHD)

Pathogenesis

  • Strep infection → Anti-streptococcal antibodies
  • Cross-react with cardiac proteins (valves, myocardium)
  • Type II (cytotoxic) + Type III hypersensitivity
  • Aschoff body forms in myocardium = PATHOGNOMONIC

Gross Appearance

Acute RHD:
  • Verrucous endocarditis: Small (1-2 mm), warty, vegetation along line of closure of valve (mitral >> aortic)
  • Vegetation: sterile, firm, rough
  • Pancarditis: pericarditis (fibrinous - "bread and butter" pericarditis), myocarditis, endocarditis
Chronic RHD:
  • Mitral stenosis (most common residual lesion)
  • Thickened, fused valve cusps, "fish mouth" or "button-hole" mitral valve
  • Chordae tendineae: thickened, fused, shortened → subvalvular stenosis

Microscopy

ASCHOFF BODY (pathognomonic of acute RHD):
  • Central area of fibrinoid necrosis
  • Surrounded by Aschoff cells (modified macrophages with "owl eye" or "caterpillar/Anichkov" nuclei)
  • Peripheral lymphocytes and plasma cells
  • Located in interstitial connective tissue of myocardium
Chronic RHD:
  • Valve: fibrosis, neovascularization, calcification
  • Fused commissures, thickened leaflets

25. INFECTIVE ENDOCARDITIS

Definition

Infective endocarditis (IE) is a microbial infection of the endocardial surface of the heart, particularly the heart valves, characterized by the formation of vegetations (infected thrombi).

Etiology

TypeOrganismSetting
Acute (ABE)S. aureus (most common)Normal valve, IV drug users
Subacute (SBE)S. viridans (most common)Damaged valve (RHD), dental procedures
IV drug userS. aureus, CandidaTricuspid valve affected
NosocomialS. epidermidis, EnterococcusProsthetic valves, catheters

Pathogenesis

  • Turbulent blood flow → endothelial injury → sterile thrombus
  • Bacteremia (dental/IV procedure) → bacteria adhere to thrombus → multiply
  • Vegetation grows: bacteria + platelets + fibrin + inflammatory cells
  • Emboli from vegetation → septic emboli → metastatic abscesses

Gross Appearance

Acute IE:
  • Large (1-5 cm), irregular, friable, destructive vegetations
  • On any part of valve (often destructive - perforate cusps)
  • Vegetations: yellow-grey, ragged, irregular
Subacute IE:
  • Smaller, firmer vegetations on valve line of closure
  • Less destructive
Vegetations comparison:
TypeVegetationOrganism
InfectiveLarge, destructive, friableBacteria
RheumaticSmall, warty, along line of closureSterile
Non-bacterial thrombotic (Marantic)Small, sterileNo organisms
Libman-Sacks (SLE)Both surfacesSterile

Microscopy

  • Vegetation: Inflammatory cells (neutrophils), bacteria, platelets, fibrin
  • Bacterial colonies within vegetation - confirmatory
  • Valve tissue: necrosis, neutrophilic infiltration
  • Underlying valve: fibrosis in chronic cases
Osler's nodes (painful, immune complex - finger tips), Janeway lesions (painless, septic emboli - palms/soles)

26. PNEUMONIA

Definition

Pneumonia is acute inflammation of the lung parenchyma (alveoli and terminal bronchioles) caused by infectious or non-infectious agents.

Classification

TypePathogenPattern
Lobar pneumoniaS. pneumoniae (most common)Entire lobe consolidated
BronchopneumoniaS. aureus, H. influenzae, gram-negPatchy, around bronchi
Interstitial pneumoniaViruses, MycoplasmaInterstitium involved
Primary atypicalMycoplasma, Legionella, Chlamydia"Walking pneumonia"

Etiology

  • Community-acquired: S. pneumoniae (#1)
  • Hospital-acquired (nosocomial): Gram-negative organisms (Klebsiella, Pseudomonas), S. aureus
  • Aspiration: Anaerobes
  • Immunocompromised: PCP (Pneumocystis jirovecii), CMV, Aspergillus

Pathogenesis

  • Organisms reach alveoli → innate immune response
  • Exudate fills alveoli → consolidation → impaired gas exchange

Gross Appearance (Lobar pneumonia - 4 stages)

StageTimeAppearance
CongestionDay 1-2Heavy, boggy, red lung; wet on cut section
Red HepatizationDay 2-4Firm, red, liver-like (hepatization); dry, airless on cut section
Grey HepatizationDay 4-8Grey-yellow, dry, granular; fibrin + WBCs replace RBCs
ResolutionDay 8+Enzymatic digestion of exudate, lung returns to normal

Microscopy

StageMicroscopy
CongestionDilated capillaries, serous exudate, few bacteria in alveoli
Red hepatizationAlveoli filled with: RBCs + neutrophils + fibrin
Grey hepatizationNeutrophils + fibrin (RBCs lysed), macrophages appear
ResolutionMacrophages phagocytose debris, alveolar architecture restored
Bronchopneumonia: Patchy, multifocal; bronchi and surrounding alveoli filled with neutrophils and pus; septal thickening

27. TUBERCULOSIS (TB)

Definition

TB is a chronic granulomatous infectious disease caused by Mycobacterium tuberculosis (acid-fast bacilli), primarily affecting the lungs but capable of affecting any organ.

Etiology

  • M. tuberculosis (human) - most common
  • M. bovis (bovine) - through milk
  • Transmission: Droplet nuclei (airborne)
  • Virulence: Cord factor (trehalose dimycolate) - inhibits phagosome-lysosome fusion
  • Ghon focus: Primary lesion (usually subpleural, upper zone of lower lobe or lower zone of upper lobe)

Pathogenesis

Primary TB:
  1. Inhalation → alveolar macrophages phagocytose bacteria
  2. Bacteria survive in phagosome (cord factor prevents fusion with lysosome)
  3. Bacteria multiply, macrophages die → bacteremia
  4. 3-8 weeks: Th1 response activated → DTH (Type IV HSR)
  5. Granuloma forms (see Granulomatous inflammation)
  6. Ghon focus + Hilar lymph node granuloma = Ghon complex
Secondary (Post-primary) TB:
  • Reactivation in immunocompromised
  • Apical (upper lobe, Simon's focus) - most common
  • Cavitation (hallmark) - central caseous necrosis liquefies, drains via bronchus

Gross Appearance

Primary TB:
  • Ghon focus: 1-2 cm subpleural focus of grey-white consolidation, with caseous center
  • Ghon complex: Ghon focus + hilar lymphadenopathy
Secondary/Post-primary TB:
  • Apical cavities: irregular walled cavities, caseous walls
  • Cavities contain grey necrotic material
  • Upper lobe consolidation and fibrosis
  • Miliary TB: Tiny 1-2mm millet seed-like granulomas throughout lung (hematogenous spread)

Microscopy

  • Classic caseating granuloma:
    • Central caseous (cheese-like, pink, granular, acellular) necrosis
    • Epithelioid cells with Langhans giant cells
    • Peripheral lymphocyte cuff
    • Outer rim fibroblasts
  • AFB stain (Ziehl-Neelsen/ZN): Red bacilli on blue background (acid-fast positive)

28. EMPHYSEMA & COPD

Definition

COPD: A chronic, progressive respiratory disease characterized by airflow limitation that is not fully reversible. Two main subtypes: Emphysema and Chronic Bronchitis.
Emphysema: Permanent abnormal enlargement of airspaces distal to terminal bronchioles, accompanied by destruction of alveolar walls WITHOUT significant fibrosis.

Etiology

  • Smoking (most important for both)
  • Alpha-1 antitrypsin (AAT) deficiency → emphysema (especially panacinar, in non-smokers, young adults)
  • Air pollution, occupational dusts

Pathogenesis

Protease-antiprotease theory:
  • Smoking → inflammation → macrophages + neutrophils release elastase and other proteases
  • Proteases digest elastin in alveolar walls → alveolar destruction
  • Normally: AAT (alpha-1 antitrypsin) inhibits elastase
  • Smoking or AAT deficiency → protease activity unopposed → alveolar wall destruction → emphysema
Types of emphysema:
TypeLocationCause
Centriacinar (centrilobular)Central acinus (respiratory bronchioles)Smoking - most common
Panacinar (panlobular)Entire acinusAAT deficiency, smoking
ParaseptalDistal acinus, subpleuralSpontaneous pneumothorax in young
IrregularIrregularScarring

Gross Appearance

  • Lungs hyperinflated, barrel-shaped chest
  • Large air spaces (bullae) - especially in subpleural areas
  • Emphysematous bullae: thin-walled, > 1 cm air spaces
  • Pale, voluminous lungs
  • On palpation: abnormally light, crackle on compression
  • Centriacinar: more severe in UPPER lobes
  • Panacinar: more severe in LOWER lobes

Microscopy

  • Enlarged air spaces with destruction of alveolar walls (septa)
  • Reduced number of alveolar septa
  • Loss of pulmonary capillaries
  • No fibrosis
  • Centriacinar: central dilation, peripheral alveoli preserved
  • Inflammatory cells, mucus glands (in chronic bronchitis)
  • "Pink puffer" (emphysema-dominant): thin, barrel chest, pursed lip breathing, no cyanosis

29. BRONCHIECTASIS

Definition

Bronchiectasis is a permanent, abnormal dilatation of the bronchi and bronchioles (>2mm diameter) due to destruction of the bronchial wall, associated with chronic infection and inflammation.

Etiology

  • Post-infectious: TB, measles, whooping cough, childhood pneumonia
  • Obstruction: tumor, foreign body → distal dilatation
  • Cystic fibrosis (most common cause in West)
  • Primary ciliary dyskinesia (Kartagener syndrome)
  • Immune deficiency: hypogammaglobulinemia

Pathogenesis

  • Infection → chronic inflammation → proteases destroy bronchial wall (elastin, cartilage)
  • Loss of structural support → permanent dilation
  • Vicious cycle: dilation → mucus pooling → more infection → more destruction

Gross Appearance

  • Most common: lower lobes, bilateral
  • Bronchi abnormally dilated to periphery (normally taper)
  • Types: cylindrical, varicose, saccular (most severe)
  • Purulent mucus in dilated bronchi
  • Cut surface: "honeycomb" appearance due to cystic spaces
  • Peribronchial fibrosis

Microscopy

  • Dilated bronchi/bronchioles with thickened, inflamed walls
  • Destroyed cartilage and elastic tissue
  • Mucosal ulceration and squamous metaplasia
  • Marked chronic inflammation (lymphocytes, plasma cells, neutrophils in lumen)
  • Peribronchial fibrosis
  • Mucus plugging

30. ADULT RESPIRATORY DISTRESS SYNDROME (ARDS)

Definition

ARDS (also called Diffuse Alveolar Damage - DAD) is a clinical syndrome of severe, acute respiratory failure characterized by non-cardiogenic pulmonary edema due to diffuse alveolar injury.

Etiology (Triggers)

  • Direct lung injury: Pneumonia (most common), aspiration, toxic gas inhalation, near-drowning
  • Indirect (systemic): Sepsis (most common indirect cause), severe trauma, burns, blood transfusions (TRALI), pancreatitis

Pathogenesis

  • Trigger → diffuse alveolar injury → endothelial + epithelial cell damage
  • ↑ Vascular permeability → protein-rich fluid floods alveoli
  • Surfactant loss → alveolar collapse
  • Hyaline membranes form (fibrin + necrotic epithelial cells)
  • Impaired gas exchange → hypoxemia

Gross Appearance

  • Lungs: heavy, dark red, meaty, congested ("hepatized")
  • Airless, non-crepitant
  • Diffuse consolidation
  • Subpleural petechiae

Microscopy

Exudative phase (acute, 1-7 days):
  • Alveolar edema
  • Hyaline membranes lining alveolar walls (PAS+, eosinophilic) - HALLMARK
  • Alveolar macrophages, neutrophils
  • Capillary congestion with microthrombi
Proliferative phase (1-3 weeks):
  • Type II pneumocyte hyperplasia (attempts to repair)
  • Organization of exudate
  • Fibroblast proliferation
Fibrotic phase (>3 weeks):
  • Interstitial and intra-alveolar fibrosis
  • Thickened alveolar walls
  • Destruction of architecture

PART 4: SYSTEMIC PATHOLOGY - KIDNEY & GI


31. GLOMERULONEPHRITIS

Definition

Glomerulonephritis (GN) is inflammation of the glomeruli, usually immunologically mediated, leading to impaired filtration, proteinuria, hematuria, and eventual renal failure.

Etiology & Types

Two main immunological mechanisms:
  1. Immune complex deposition (Type III HSR): most common
  2. Anti-GBM antibody (Type II HSR): Goodpasture syndrome
Common GN types:
TypeClinical PresentationMicroscopyIFEM
Post-strep GN (most common in children)Nephritic syndromeHypercellular glomeruli, "lumpy-bumpy" IFGranular (coarse)Subepithelial humps ("camel humps")
IgA Nephropathy (Berger's)Recurrent hematuriaMesangial proliferationMesangial IgA depositsMesangial deposits
Membranous GNNephrotic syndromeThickened GBM, "spike and dome"Granular, subepithelialSubepithelial deposits ("spikes")
Minimal Change DiseaseNephrotic syndrome (children)Normal by LMNegative IFEffacement of foot processes (EM only)
FSGSNephrotic syndromeFocal segmental sclerosisFocal IgM, C3Foot process effacement
GoodpastureRPGN + lung hemorrhageCrescentic GNLinear IgG (anti-GBM)GBM disruption
Crescentic GN (RPGN)Rapidly progressive renal failureCrescents (Bowman's space filled)Variable-

Pathogenesis (Post-Streptococcal GN)

  • Group A Strep infection (skin/throat) → antigen-antibody complexes in circulation → deposit in glomeruli
  • Complement activation → neutrophil recruitment → glomerular damage
  • ↑ Permeability → hematuria, proteinuria
  • Epithelial "humps" = subepithelial immune complexes

Gross Appearance

  • Kidney enlarged, swollen
  • Flea-bitten kidney: multiple petechial hemorrhages on surface (acute GN)
  • In chronic GN: small, granular contracted kidney

Microscopy

Post-Strep GN:
  • Diffuse glomerular hypercellularity (endothelial + mesangial + neutrophil infiltration)
  • Glomerular capillary loops compressed
  • "Lumpy bumpy" pattern on IF (granular IgG, C3)
  • Subepithelial humps on EM

32. NEPHROTIC vs NEPHRITIC SYNDROME

FeatureNephroticNephritic
ProteinuriaMassive (>3.5 g/day)Mild to moderate
HematuriaAbsent or mildPresent (RBC casts)
EdemaSevere, generalizedMild
HypertensionMildProminent
Renal functionInitially preservedReduced GFR, oliguria
Key findingHypoalbuminemiaActive urinary sediment
CausesMCD, Membranous GN, FSGS, Diabetic nephropathyPost-Strep GN, IgA nephropathy, Goodpasture, Crescentic GN

33. PYELONEPHRITIS

Definition

Pyelonephritis is bacterial infection of the renal pelvis, calyces, and parenchyma, classified as acute (suppurative) or chronic.

Etiology

  • Most common organism: E. coli (80%) - has P-fimbriae for uroepithelial adhesion
  • Others: Klebsiella, Proteus, Enterococcus
  • Route: Ascending infection (most common) from bladder via ureter
  • Risk factors: Female sex (short urethra), pregnancy, urinary tract obstruction, vesicoureteral reflux (VUR), catheterization, diabetes

Pathogenesis

Ascending route:
  • Bacteria colonize perineum/urethra → bladder → ureter (retrograde) → renal pelvis → parenchyma
  • VUR facilitates ascent
  • Obstruction (stones, BPH) causes stasis → bacterial growth

Gross Appearance

Acute pyelonephritis:
  • Enlarged kidney, edematous
  • Yellow-white abscesses in cortex and medulla (wedge-shaped or random)
  • Yellow streaks from medulla to cortex
  • Pelvic mucosa hyperemic, covered with purulent exudate
Chronic pyelonephritis:
  • Small, contracted kidney with irregular surface
  • Cortical scars overlying dilated calyces (hallmark)
  • Blunted calyces
  • Thyroidization of tubules (tubules filled with eosinophilic material like thyroid colloid)

Microscopy

Acute:
  • Tubules filled with neutrophil casts (WBC casts in urine - diagnostic)
  • Interstitial edema with neutrophil infiltration
  • Glomeruli spared (early)
  • Microabscesses
Chronic:
  • Interstitial fibrosis and tubular atrophy
  • Chronic inflammation (lymphocytes, plasma cells)
  • Thyroidization: tubules filled with eosinophilic colloid-like material
  • Glomerular sclerosis
  • Vascular sclerosis

34. PEPTIC ULCER DISEASE (PUD)

Definition

A peptic ulcer is a break in the mucosa of the GI tract (stomach or duodenum) extending through the muscularis mucosae into the submucosa or deeper, due to imbalance between acid/pepsin (aggressive) and mucosal defense (protective) factors.

Etiology

  1. H. pylori infection (most common cause - 95% of duodenal, 70% of gastric ulcers)
  2. NSAIDs (↓ prostaglandins → ↓ mucus + ↓ blood flow)
  3. Zollinger-Ellison syndrome (gastrinoma - massive acid secretion)
  4. Stress ulcers (Curling - burns; Cushing - brain injury)
  5. Smoking, alcohol, steroids

Pathogenesis

  • H. pylori: Urease → NH₃ → cytotoxins (CagA, VacA) → mucosal damage; impairs mucosal repair
  • NSAIDs: Inhibit COX-1 → ↓ PGE2 → ↓ mucus, ↓ bicarbonate, ↓ blood flow

Gross Appearance

Benign peptic ulcer:
  • Round/oval, punched-out ulcer with clean base, smooth, vertical walls
  • Mucosal folds radiate to ulcer edge ("sun-ray" pattern)
  • Typically single
  • Gastric ulcer: lesser curvature, antrum
  • Duodenal ulcer: first part of duodenum (anterior wall)
Malignant ulcer (carcinoma):
  • Irregular, overhanging, heaped-up edges
  • Nodular, necrotic base
  • Folds do NOT radiate to ulcer edge

Microscopy

Benign peptic ulcer (4 zones from base to surface):
  1. Zone of necrosis - fibrinous debris
  2. Zone of fibrinoid necrosis - bright pink, homogeneous
  3. Zone of granulation tissue - fibroblasts, new capillaries, macrophages
  4. Zone of fibrosis - dense collagen (deepest layer)
Active ulcer: neutrophil infiltration at edges H. pylori: curved bacilli on mucosal surface (Giemsa, Warthin-Starry stains)

35. HEPATITIS B

Definition

Hepatitis B is a viral hepatic infection caused by Hepatitis B Virus (HBV), a DNA virus (Hepadnaviridae), transmitted by blood/body fluids, with potential for chronic liver disease, cirrhosis, and hepatocellular carcinoma.

Etiology

  • HBV (DNA virus, double-stranded, partially)
  • Transmission: Blood transfusion, IV drug use, sexual contact, perinatal (vertical)
  • High-risk for HCC: HBV (especially Asian genotypes B, C)
Serological markers:
MarkerMeaning
HBsAgSurface antigen - present in active infection
Anti-HBsRecovery/vaccination
HBeAgReplicating virus, HIGH infectivity
Anti-HBe↓ viral replication
HBcAgCore antigen (not in serum)
Anti-HBc IgMAcute infection
Anti-HBc IgGPast infection
"Window period"HBsAg gone, anti-HBs not yet; only anti-HBc IgM positive

Pathogenesis

  • HBV is NOT directly cytopathic - liver injury is immune-mediated (CD8+ CTL attack hepatocytes expressing HBV antigens)
  • Acute HBV → resolves in 90% adults
  • 5-10% → chronic hepatitis → cirrhosis → HCC
  • Integration of HBV DNA → activation of proto-oncogenes → HCC

Gross Appearance

Acute hepatitis:
  • Liver: enlarged, soft, congested, yellow
Chronic active hepatitis:
  • Enlarged, nodular (early cirrhosis)
  • Biliary cirrhosis appearance eventually
Cirrhosis (end stage):
  • Small, firm, micronodular liver (1-3mm nodules)

Microscopy

Acute hepatitis:
  • Hepatocyte ballooning degeneration (swollen, pale cells)
  • Acidophil bodies (Councilman bodies): shrunken, eosinophilic hepatocytes = apoptosis
  • Portal tract inflammation (lymphocytes, macrophages)
  • Interface hepatitis (periportal necrosis)
  • Kupffer cell hypertrophy
Chronic hepatitis:
  • Ground glass hepatocytes (HBsAg accumulation in ER) - PATHOGNOMONIC for HBV
  • Piecemeal necrosis / interface hepatitis
  • Portal-to-portal bridging necrosis
  • Progressive fibrosis → cirrhosis
  • Orcein stain, Shikata orcein: highlights ground glass cells (HBsAg)

36. FATTY LIVER (HEPATIC STEATOSIS)

Definition

Fatty liver (hepatic steatosis) is the abnormal accumulation of triglycerides within hepatocytes (>5% of liver cells contain fat).

Etiology

Most common causes:
  • Alcohol (most common worldwide)
  • Obesity + Metabolic syndrome (non-alcoholic fatty liver disease - NAFLD)
  • Diabetes mellitus
  • Drugs: Steroids, methotrexate, amiodarone, tetracycline
  • Pregnancy (acute fatty liver of pregnancy)
  • Starvation/protein deficiency (Kwashiorkor)

Pathogenesis

Alcohol-induced:
  • Alcohol → acetaldehyde → disrupts lipid oxidation
  • ↓ Fatty acid oxidation + ↑ fatty acid synthesis
  • ↓ Lipoprotein export (VLDL)
  • Net: fat accumulates as triglycerides in hepatocytes
NAFLD:
  • Insulin resistance → ↑ FFA delivery to liver → triglyceride accumulation
  • Oxidative stress → progression to NASH (non-alcoholic steatohepatitis) → fibrosis

Gross Appearance

  • Enlarged liver (hepatomegaly)
  • Soft, yellow-colored
  • Greasy feel, floats on water
  • Smooth edges (no cirrhosis in early stage)
  • Massive fatty change: "foie gras" appearance

Microscopy

  • Large clear cytoplasmic vacuoles displacing nucleus to periphery (macrovesicular steatosis) - MOST COMMON
  • Microvesicular steatosis: small droplets around nucleus (acute fatty liver of pregnancy, Reye syndrome)
  • Alcoholic hepatitis: Macrovesicular steatosis + Mallory-Denk bodies (Mallory hyaline - pink rope-like cytoplasmic inclusions) + neutrophil infiltration
  • Special stain: Oil red O (stains fat red, on frozen section)

37. HEPATOCELLULAR CARCINOMA (HCC)

Definition

HCC is the most common primary malignant tumor of the liver, arising from hepatocytes, usually developing in the background of chronic liver disease/cirrhosis.

Etiology

  • Hepatitis B (most common worldwide) - HBV DNA integrates into host genome
  • Hepatitis C - more common in developed countries
  • Cirrhosis (from any cause)
  • Aflatoxin B1 (fungal toxin from Aspergillus in grain - common in Africa/Asia) - forms aflatoxin-p53 adducts
  • Alcohol-related cirrhosis
  • NASH → cirrhosis → HCC
  • Hereditary hemochromatosis, Wilson's disease
Tumor marker: AFP (Alpha-fetoprotein) - elevated in >70% HCC

Pathogenesis

  • Chronic hepatocyte injury → regeneration → mutations accumulate
  • Key mutations: p53, β-catenin, TERT promoter
  • HBV: X protein inactivates p53; viral DNA integration causes chromosomal instability

Gross Appearance

  • Massive type: Single large mass replacing one lobe
  • Nodular type: Multiple nodules throughout liver (common in cirrhosis)
  • Diffuse type: Barely distinguishable from cirrhotic liver
  • Tumor: grey-white or yellow-green (bile staining), soft, necrotic
  • Bile production by tumor cells (pathognomonic)
  • Portal vein invasion → tumor thrombus
  • Hepatic vein invasion → IVC spread

Microscopy

  • Cells resemble hepatocytes but with nuclear pleomorphism, prominent nucleoli
  • Trabecular pattern (most common) - tumor cells arranged in thick trabeculae (2-3+ cells wide)
  • Sinusoidal blood spaces between trabeculae
  • Bile production in cytoplasm (green pigment)
  • Mallory-Denk bodies may be present
  • Pseudo-glandular (acinar) pattern
  • Vascular invasion - key finding
  • Fibro-lamellar HCC (special variant): young patients, NO cirrhosis, large eosinophilic cells with pale fibrous bands, better prognosis

38. PORTAL HYPERTENSION

Definition

Portal hypertension is elevated pressure in the portal venous system (>5 mmHg above inferior vena cava pressure; normal 5-10 mmHg; portal HTN >12 mmHg).

Etiology / Classification

LevelCauses
Pre-hepaticPortal vein thrombosis, splenic vein thrombosis
Intra-hepatic (sinusoidal)Cirrhosis (most common), schistosomiasis, sarcoidosis
Post-hepatic (outflow obstruction)Budd-Chiari syndrome (hepatic vein thrombosis), cardiac failure

Pathogenesis

  • Liver fibrosis (cirrhosis) → architectural distortion → increased resistance to portal flow
  • ↑ Portal pressure → development of portosystemic collaterals
  • Congestion of spleen → splenomegaly + hypersplenism

Gross Appearance

  • Liver: cirrhotic (firm, nodular, small)
  • Splenomegaly (congestive splenomegaly - "Banti syndrome")
  • Ascites (peritoneal fluid)
Portosystemic collaterals (Gross):
  • Esophageal varices (left gastric → azygos system) - most important (rupture → fatal hemorrhage)
  • Rectal varices (superior → inferior rectal veins)
  • Caput medusae (paraumbilical veins dilated)
  • Retroperitoneal collaterals

Microscopy

  • Cirrhotic liver: regenerative nodules surrounded by fibrous septa (Masson trichrome stain: blue fibrosis)
  • Spleen: dilated sinusoids, hemosiderin deposits, fibrosis ("Gamma-Gandy" bodies)
  • Esophageal varices: dilated, thin-walled submucosal veins

39. INFLAMMATORY BOWEL DISEASE (IBD)

Crohn's Disease vs Ulcerative Colitis

FeatureCrohn's DiseaseUlcerative Colitis
DistributionAny part of GI tract (mouth to anus); patchy ("skip lesions")Colon only; continuous from rectum
RectumUsually sparedAlways involved
DepthTransmural (all layers)Mucosa + submucosa only
GranulomasYES (non-caseating)NO
FistulaeCommon (transmural)Rare
StricturesCommon ("cobblestone" + "skip")Rare
Gross"Cobblestone" mucosa, "Creeping fat," "Hosepipe" bowelPseudopolyps, ulcers, hyperemia
Risk of cancerSlightly increasedMarkedly increased (colitis-associated CA)
ExtraintestinalMore commonLess common
Etiology (both): Genetic (NOD2 in Crohn's), dysregulated immune response to gut flora, smoking (worsens Crohn's, protective in UC)

Pathogenesis

  • Abnormal Th1 (Crohn's) or Th2 (UC) response to gut bacteria
  • Mucosal barrier dysfunction → bacterial invasion → inflammation
  • Crohn's: granulomatous transmural inflammation
  • UC: superficial mucosal inflammation with crypt abscesses

Gross

Crohn's:
  • Skip lesions (alternating normal and diseased segments)
  • "Cobblestone" mucosa (edematous islands between linear ulcers)
  • "Creeping fat" (mesenteric fat wraps around bowel)
  • Fistulae, sinuses
  • Strictures → obstruction ("Hosepipe/lead pipe sign" on barium)
UC:
  • Continuous involvement from rectum
  • Mucosal hemorrhage, ulcers
  • Pseudopolyps (islands of regenerating mucosa between ulcers)
  • "Lead pipe" colon on X-ray (loss of haustrations)
  • Toxic megacolon in severe cases

Microscopy

Crohn's: Transmural chronic inflammation, non-caseating granulomas, lymphoid aggregates in all layers UC: Mucosal and submucosal inflammation; Crypt abscesses (crypts filled with neutrophils); goblet cell depletion; crypt architectural distortion (branching)

PART 5: SYSTEMIC PATHOLOGY - GYNECOLOGY/ONCOLOGY/BONE


40. CARCINOMA CERVIX

Definition

Carcinoma cervix is a malignant tumor of the cervix uteri, most commonly squamous cell carcinoma, arising from the transformation zone (squamocolumnar junction), strongly associated with HPV infection.

Etiology

  • Human Papillomavirus (HPV) - present in >99% cases
    • High-risk types: HPV 16 (SCC) and HPV 18 (Adenocarcinoma) - most important
  • Multiple sexual partners, early sexual activity
  • Smoking, oral contraceptives, immunosuppression
  • Previous STIs (Chlamydia, HSV)

Pathogenesis

  • HPV infects transformation zone epithelium (squamocolumnar junction)
  • E6 oncoprotein binds and degrades p53 → no apoptosis
  • E7 oncoprotein binds and inactivates Rb → uncontrolled cell cycle progression
  • Normal → CIN1 → CIN2 → CIN3/CIS → Invasive SCC
  • HPV 16/18 integration into host genome → stable malignant transformation

Gross Appearance

  • Preclinical/CIN: Acetowhite areas on colposcopy, erosion
  • Exophytic type (most common): Cauliflower-like, friable mass
  • Ulcerative type: Necrotic ulcer with everted, ragged edges
  • Infiltrative (barrel-shaped): Expanded, hard cervix
  • Invades vagina, bladder, rectum, parametrium

Microscopy

CIN (cervical intraepithelial neoplasia):
  • Koilocytes (HPV-infected cells): large squamous cells with perinuclear halo (clear space) + nuclear enlargement and hyperchromasia - PATHOGNOMONIC of HPV
  • CIN 1: lower 1/3 involved
  • CIN 2: lower 2/3 involved
  • CIN 3/CIS: full thickness involved, BM intact
Invasive SCC:
  • Keratin pearls (squamous eddies) - concentric whorls of keratinizing cells - HALLMARK of well-differentiated SCC
  • Intercellular bridges between cells
  • Invasion through BM into stroma
  • Desmoplastic stroma around nests

41. CARCINOMA BREAST

Definition

Carcinoma of the breast is a malignant epithelial tumor of the breast, most commonly arising from the ductal epithelium of the terminal duct lobular unit (TDLU).

Etiology

  • Female sex, increasing age (most important risk factors)
  • BRCA1 (chromosome 17q - associated with triple negative CA) and BRCA2 (13q) mutations - hereditary
  • Hormonal: early menarche, late menopause, nulliparity, OCP use, HRT
  • Radiation, obesity, alcohol
  • Family history
  • Previous benign breast diseases: atypical ductal hyperplasia

Pathogenesis

  • Hormonal influence: estrogen stimulates ductal proliferation
  • Mutations in BRCA1/2 → impaired DNA repair → genomic instability
  • ER+, PR+, HER2+ tumors have targeted therapy available
  • Triple negative (ER-, PR-, HER2-) = worst prognosis, no targeted therapy, BRCA1-related
Classification:
  • In situ: DCIS (Ductal Carcinoma in situ) - no invasion
  • Invasive/Infiltrating:
    • Invasive ductal carcinoma (IDC/NST) - most common (70%)
    • Invasive lobular carcinoma (ILC) - 15%
    • Special types: Mucinous, Tubular, Medullary

Gross Appearance

IDC:
  • Stony-hard, irregular, stellate mass
  • Scirrhous consistency (dense fibrous stroma - "desmoplasia")
  • Grey-white with gritty texture on cut section
  • Irregular, infiltrative borders
  • Skin retraction, nipple retraction
  • "Peau d'orange" (skin dimpling, dermal lymphatic obstruction)

Microscopy

IDC (Not Otherwise Specified):
  • Irregular nests, cords, tubules of malignant cells in desmoplastic stroma
  • Nuclear pleomorphism, hyperchromatism, prominent nucleoli
  • Mitoses
  • Necrosis (comedonecrosis in DCIS)
  • Lymphatic/vascular invasion
  • Lymph node metastasis
DCIS: Malignant cells filling ducts, BM intact; comedonecrosis (central necrosis + calcification in high-grade DCIS) - calcification visible on mammogram
IHC markers: ER, PR, HER2 (scored by IHC or FISH) - determines therapy (Tamoxifen for ER+, Trastuzumab/Herceptin for HER2+)

42. OSTEOSARCOMA

Definition

Osteosarcoma is the most common primary malignant tumor of bone (excluding myeloma), characterized by the production of osteoid or bone directly by malignant cells (tumor osteoid).

Etiology

  • Peak age: 10-20 years (adolescents), second peak in elderly (Paget's disease, radiation)
  • Males > Females
  • Most common site: Metaphysis of long bones (distal femur > proximal tibia > proximal humerus = around the knee)
  • Risk: RB gene mutation (hereditary retinoblastoma patients have 500x risk), p53 mutation, Paget's disease, radiation, Li-Fraumeni syndrome

Pathogenesis

  • Loss of tumor suppressor genes (RB, p53) + activation of oncogenes
  • Malignant osteoblasts produce tumor osteoid (immature woven bone directly by tumor cells)
  • Tumor breaks through cortex → periosteal reaction
Serum alkaline phosphatase: Elevated (osteoblastic activity)

Gross Appearance

  • Metaphyseal location
  • Tumor: grey-white, gritty (calcified areas), with areas of hemorrhage and necrosis
  • Cortical destruction + extension into soft tissues
  • Periosteum lifted → Codman's triangle (reactive bone at periosteal margin)
  • "Sunburst pattern" on X-ray (radiating spicules of bone)

Microscopy

  • Malignant osteoblasts (pleomorphic, hyperchromatic, mitoses)
  • Tumor osteoid (pink, amorphous, lace-like, irregular matrix) - DIAGNOSTIC KEY
  • Tumor osteoid directly produced by malignant cells (without normal trabecular organization)
  • Areas of chondroid and fibrous tissue also present (mixed)
  • Calcification in osteoid
Variants: Osteoblastic (most common), chondroblastic, fibroblastic

43. GIANT CELL TUMOUR OF BONE (GCT)

Definition

GCT is a locally aggressive benign (but can rarely be malignant) bone tumor characterized by numerous multinucleated osteoclast-like giant cells on a background of mononuclear stromal cells.

Etiology

  • Age: 20-40 years (young adults, after epiphyseal fusion)
  • More common in females
  • Most common site: Epiphysis of long bones (distal femur, proximal tibia, distal radius)
  • RANK-L mutation in stromal cells → osteoclast recruitment

Pathogenesis

  • Mononuclear stromal cells (neoplastic cells) produce RANKL
  • RANKL recruits and activates osteoclast-like multinucleated giant cells
  • Giant cells resorb bone → osteolytic lesion
  • Treatment: Denosumab (anti-RANKL antibody)

Gross Appearance

  • Epiphyseal location extending to articular surface (unique feature)
  • "Soap bubble" or "egg-shell" appearance on X-ray (eccentric, lytic, no sclerotic rim, extends to articular surface)
  • Tumor: red-brown, soft, vascular, with areas of hemorrhage and necrosis
  • Thin cortex (egg-shell cortex)
  • No calcification usually

Microscopy

  • Numerous multinucleated osteoclast-like giant cells (10-100 nuclei per giant cell) uniformly distributed - KEY FEATURE
  • Background of mononuclear stromal cells (spindle-shaped, oval nuclei identical to giant cell nuclei)
  • Rich vascularity
  • Hemosiderin deposits (brown pigment) - "rusty" areas
  • No tumor osteoid (unlike osteosarcoma)
  • Mitoses in stromal cells but not atypical

44. WILMS TUMOUR (NEPHROBLASTOMA)

Definition

Wilms tumour (nephroblastoma) is the most common primary renal malignancy of childhood (peak age 3-4 years), a mixed tumor containing blastemal, stromal, and epithelial elements recapitulating different stages of normal kidney development.

Etiology

  • Age: 3-4 years (most common)
  • Associated syndromes:
    • WAGR syndrome: Wilms + Aniridia + Genitourinary anomalies + intellectual Retardation (WT1 gene deletion on 11p13)
    • Denys-Drash syndrome: WT1 mutation + diffuse mesangial sclerosis + gonadal dysgenesis
    • Beckwith-Wiedemann syndrome: WT2 gene + organomegaly, macroglossia
  • WT1 gene (chromosome 11p13): tumor suppressor gene

Pathogenesis

  • WT1 gene loss → abnormal metanephric blastema development → persistent nephrogenic rests → Wilms tumor
  • Mutations in WT1 and WTX genes

Gross Appearance

  • Large, solitary (usually), well-encapsulated tumor
  • Soft, homogeneous, pale grey-tan ("fish flesh") with foci of necrosis, hemorrhage, cysts
  • Pseudocapsule present (well-defined border)
  • Distorts the kidney
  • Usually unilateral (5-10% bilateral)

Microscopy

Classic triphasic pattern (pathognomonic):
  1. Blastemal component: Small, closely packed oval to spindle blue cells with scant cytoplasm (sheets of primitive cells)
  2. Epithelial component: Attempts at tubule and glomerulus formation (primitive tubular structures)
  3. Stromal component: Spindle cells, loose myxoid stroma, may contain heterologous elements (smooth/skeletal muscle, cartilage, fat)
  • Anaplasia (nuclear atypia) = poor prognosis

45. CARCINOMA PROSTATE

Definition

Prostate carcinoma is the most common malignancy in elderly males (>50 years), arising predominantly from the peripheral zone of the prostate, almost always adenocarcinoma.

Etiology

  • Age >50 years, most common in >70 years
  • Race: African-Americans highest risk
  • Androgen dependence (testosterone drives growth)
  • Genetic: BRCA2, AR mutations
  • Dietary fat, family history
Tumor marker: PSA (Prostate-Specific Antigen) - elevated in carcinoma, BPH, prostatitis

Pathogenesis

  • Androgen stimulation of peripheral zone cells
  • Key mutations: Loss of PTEN, AR amplification, TMPRSS2-ERG fusion
  • PIN (Prostatic Intraepithelial Neoplasia) → precursor

Gross Appearance

  • Usually peripheral zone (posterior lobe, palpable on DRE)
  • Irregular, hard, gritty areas
  • Grey-white, firm, poorly defined
  • Difficult to distinguish from normal prostate grossly in early stage
  • Advanced: invades seminal vesicles, rectum

Microscopy

Gleason Grading System (key exam topic):
  • Grade 1: Small, uniform glands, closely packed (well-differentiated)
  • Grade 3: Infiltrating glands, angular
  • Grade 4: Fused glands, cribriform pattern
  • Grade 5: No gland formation, sheets of cells
  • Gleason Score = Primary grade + Secondary grade (e.g., 3+4=7)
  • Higher score = worse prognosis
Diagnostic features:
  • Absent basal cell layer (key feature - normal prostate has two layers; carcinoma loses basal cells)
  • Prominent nucleoli ("owls eye")
  • Nuclear pleomorphism
  • Perineural invasion
  • IHC: PSA+, PSAP+, CK903 negative (basal cells absent)
  • AMACR (racemase) positive - useful IHC marker for carcinoma

46. DIABETIC NEPHROPATHY

Definition

Diabetic nephropathy is the kidney disease specifically caused by diabetes mellitus (both Type 1 and 2), characterized by proteinuria, hypertension, and progressive renal failure; the most common cause of end-stage renal disease (ESRD) worldwide.

Etiology

  • Diabetes mellitus (Type 1 > Type 2 in severity but Type 2 more common numerically)
  • Risk factors: poor glycemic control, hypertension, genetic predisposition, duration of diabetes

Pathogenesis

Four major mechanisms:
  1. Advanced Glycation End products (AGEs): Cross-link proteins in GBM → thickening + ↑ permeability
  2. Polyol pathway activation: Sorbitol accumulates → osmotic damage
  3. PKC (Protein Kinase C) activation: VEGF ↑ → endothelial damage
  4. Glomerular hypertension: Early hyperfiltration (↑ GFR) → progressive glomerulosclerosis
Progression (Mogensen stages):
  • Stage 1: Hyperfiltration (↑GFR, normal urine)
  • Stage 2: Microalbuminuria (30-300 mg/day)
  • Stage 3: Overt proteinuria (>300 mg/day)
  • Stage 4: Nephrotic syndrome + declining GFR
  • Stage 5: ESRD

Gross Appearance

  • Early: kidneys enlarged
  • Advanced: kidneys small, granular (like other causes of CKD)
  • Atherosclerosis of renal arteries

Microscopy

Key lesions:
  1. Diffuse glomerulosclerosis: Diffuse mesangial matrix expansion - most common
  2. Nodular glomerulosclerosis (Kimmelstiel-Wilson nodules): Pathognomonic - oval, acellular, PAS-positive, hyaline nodules in mesangium at periphery of glomerulus
  3. GBM thickening - diffuse
  4. Hyaline arteriolosclerosis: Both afferent AND efferent arterioles (efferent involvement = pathognomonic of diabetes)
  5. "Capsular drop" lesion: hyaline deposits between parietal epithelium and Bowman's capsule
PAS stain: Highlights the Kimmelstiel-Wilson nodules beautifully (bright pink/magenta)

47. GLIOMAS (CNS Tumours)

Definition

Gliomas are the most common primary brain tumors, arising from glial cells (astrocytes, oligodendrocytes, ependymal cells). Most common type: Glioblastoma (Grade IV astrocytoma).

Classification (WHO 2021)

TumorOriginGradeKey Feature
Pilocytic astrocytomaAstrocyteGrade IChildren, cerebellum, cystic, BRAF fusion, best prognosis
Diffuse astrocytoma (IDH-mutant)AstrocyteGrade IIYoung adults, IDH mutation, slow growing
Anaplastic astrocytomaAstrocyteGrade IIIIDH mutant
Glioblastoma (GBM)AstrocyteGrade IVMost common malignant brain tumor in adults; IDH wildtype = primary GBM
OligodendrogliomaOligodendrocyteGrade II-III1p/19q co-deletion, "fried egg" cells
EpendymomaEpendymalGrade II-IIIChildren, 4th ventricle
MedulloblastomaPNETGrade IVChildren, cerebellum, MOST COMMON in pediatric brain

Etiology

  • Most are sporadic
  • Radiation is the only well-established environmental risk
  • Genetic syndromes: Neurofibromatosis (NF1/NF2), Li-Fraumeni, Turcot syndrome

Pathogenesis

GBM primary pathway: EGFR amplification → PI3K/Akt activation; PTEN loss; p16 deletion GBM secondary pathway (from lower-grade): IDH1 mutation → TP53 mutation → progression
IDH mutation = better prognosis (IDH-mutant GBM better than IDH-wildtype)

Gross Appearance

GBM:
  • Large, poorly defined, heterogeneous mass
  • Areas of hemorrhage (red-black), necrosis (yellow-white), cystic degeneration
  • "Butterfly glioma" - crosses corpus callosum (bilateral spread)
  • Pseudopalisading necrosis visible grossly
Pilocytic astrocytoma: Cystic with mural nodule (in cerebellum) Oligodendroglioma: Well-defined, grey, gelatinous, frontal lobe

Microscopy

GBM (Glioblastoma):
  • Pseudopalisading necrosis - neoplastic cells arranged in rows around necrotic center - HALLMARK
  • Microvascular proliferation (endothelial proliferation, "glomeruloid" vessels)
  • High mitotic activity
  • Nuclear pleomorphism
  • GFAP positive (glial fibrillary acidic protein) - IHC marker for astrocytic origin
Oligodendroglioma:
  • "Fried egg" appearance - cells with round nuclei + clear cytoplasmic halo (artifact of formalin)
  • Chicken-wire vasculature (fine branching capillaries)
  • 1p/19q co-deletion (diagnostic molecular marker)
Pilocytic astrocytoma:
  • Biphasic pattern: compact fibrillar areas (Rosenthal fibers) + loose microcystic areas
  • Rosenthal fibers - elongated, corkscrew-shaped, eosinophilic hyaline bodies (GFAP+)

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