Mechanism of action uses and ADR of rifampicin in short

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Rifampicin (Rifampin)

Mechanism of Action

Rifampin enters bacterial cells and binds to the β-subunit of DNA-dependent RNA polymerase (encoded by the rpoB gene), forming a stable drug-enzyme complex. This binding suppresses RNA chain initiation and elongation, effectively blocking transcription. It does NOT inhibit mammalian RNA polymerase at therapeutic concentrations, which accounts for its selectivity.
  • It is bactericidal against actively dividing mycobacteria
  • Acts on both intracellular and extracellular organisms
  • Also kills "persisters" - semidormant bacilli that are otherwise hard to eradicate
Resistance arises from point mutations in rpoB, occurring at a rate of ~1 in 10⁷ organisms - hence it is never used as monotherapy.

Uses

IndicationRole
TuberculosisFirst-line drug in HRZE regimen (2 months intensive + 4 months continuation)
LeprosyPart of WHO multidrug therapy (MDT) for both PB and MB leprosy
Meningococcal prophylaxisChemoprophylaxis for N. meningitidis contacts
H. influenzae type b prophylaxisHousehold contacts of invasive Hib disease
BrucellosisCombined with doxycycline
MRSA/staphylococcal infectionsAdded to other agents (never alone) for prosthetic valve endocarditis, osteomyelitis
Legionnaires' diseaseAdjunct in severe cases
Atypical mycobacteria (MAC, M. kansasii)Part of combination regimens

Adverse Drug Reactions (ADRs)

1. Orange-Red Discoloration

  • Body fluids (urine, tears, saliva, sweat, sputum) turn orange-red - harmless but alarming to patients
  • Can permanently stain soft contact lenses

2. Hepatotoxicity (Most Important)

  • Transient elevation of liver enzymes common (up to 15%)
  • Frank hepatitis in ~1% - more likely with pre-existing liver disease or alcoholism
  • Mechanism: toxic metabolites + immune-mediated injury
  • Monitor LFTs before and during therapy

3. Drug Interactions - Enzyme Induction (Critical)

Rifampin is a potent inducer of CYP3A4, CYP2C9, CYP2C19, P-glycoprotein, and others. It significantly reduces levels of:
  • Oral contraceptives (contraceptive failure)
  • Warfarin (loss of anticoagulation)
  • HIV antiretrovirals (major interaction)
  • Cyclosporine, tacrolimus
  • Oral hypoglycemics, corticosteroids, methadone, azole antifungals

4. Flu-like Syndrome

  • Intermittent/high-dose regimens cause fever, chills, headache, myalgia, bone pain
  • Immunologically mediated

5. Thrombocytopenia & Hemolytic Anemia

  • Immune-mediated, more common with intermittent dosing

6. GI Effects

  • Nausea, vomiting, abdominal cramps (take on empty stomach for best absorption, but food reduces GI upset)

7. CNS Effects

  • Headache, dizziness, drowsiness, visual disturbances (uncommon)

8. Renal Effects

  • Interstitial nephritis (rare), hemoglobinuria

Key Pharmacokinetics Note

  • Well absorbed orally; food reduces absorption - best taken 30 min before meals
  • Widely distributed; penetrates CSF, macrophages, caseous lesions
  • Undergoes enterohepatic circulation; auto-induces its own metabolism (accelerated clearance after first few weeks)
  • Excreted primarily in bile/feces

Source: Goodman & Gilman's The Pharmacological Basis of Therapeutics, Chapter 65 - Rifamycins section

Mechanism of action uses and ADR of NRTI’s in short

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NRTIs - Nucleoside/Nucleotide Reverse Transcriptase Inhibitors


Mechanism of Action

NRTIs are prodrugs that require intracellular phosphorylation to become active. The process has two key steps:
  1. Phosphorylation: After entering the cell, NRTIs are sequentially phosphorylated by host kinases to their triphosphate active form (e.g., zidovudine 5'-triphosphate)
  2. Chain termination: The active triphosphate:
    • Competes with natural nucleotides for incorporation into viral DNA by HIV reverse transcriptase
    • Once incorporated, they terminate DNA chain elongation because they lack a 3'-hydroxyl (OH) group - this prevents addition of the next nucleotide
The result: HIV proviral DNA cannot be fully synthesized, blocking the virus from integrating into host genome.
NRTIs have low affinity for human DNA polymerases (except mitochondrial DNA polymerase γ - the basis of mitochondrial toxicity).

Members & Key Uses

DrugNotes / Key Use
Zidovudine (ZDV/AZT)Thymidine analogue; first antiretroviral; used in PMTCT (prevention of mother-to-child transmission)
Lamivudine (3TC)Cytidine analogue; active vs HIV-1, HIV-2, and HBV; backbone of most ART regimens
Emtricitabine (FTC)Similar to 3TC; also active vs HBV; component of most modern first-line regimens
Tenofovir DF (TDF)Nucleotide analogue (NtRTI); active vs HIV + HBV; renal/bone toxicity risk
Tenofovir AF (TAF)Newer prodrug of tenofovir; lower plasma tenofovir = less renal/bone toxicity
Abacavir (ABC)Guanosine analogue; requires HLA-B*5701 testing before use
Stavudine (d4T)Thymidine analogue; largely phased out due to toxicity
Didanosine (ddI)Largely obsolete; pancreatitis risk
Primary use: Always used as combination ART (cART) - never as monotherapy. Typically form the "backbone" of first-line HIV regimens (e.g., TDF/FTC + an INSTI or NNRTI).
Other uses:
  • HBV treatment - TDF, TAF, lamivudine, emtricitabine
  • HIV PrEP - TDF/FTC (Truvada) or TAF/FTC (Descovy)
  • PMTCT - ZDV ± single-dose nevirapine

Adverse Drug Reactions (ADRs)

Class-wide ADRs

ADRMechanismDetails
Lactic acidosis / steatohepatitisInhibition of mitochondrial DNA polymerase γ → mitochondrial dysfunctionRare but potentially fatal; more common with stavudine, didanosine, ZDV
LipodystrophyMitochondrial toxicity + metabolic effectsPeripheral fat wasting (lipoatrophy), especially stavudine
Bone marrow suppressionZidovudine mainlyAnemia, neutropenia - dose-limiting for ZDV

Drug-Specific ADRs

DrugKey ADR
Zidovudine (ZDV)Anemia, neutropenia, macrocytosis, myopathy (with long-term use), GI intolerance, headache
Tenofovir DF (TDF)Nephrotoxicity (proximal tubular dysfunction, Fanconi syndrome), decreased bone mineral density
Tenofovir AF (TAF)Less renal/bone toxicity than TDF; weight gain, dyslipidemia
Abacavir (ABC)Hypersensitivity reaction (HSR) - fever, rash, GI symptoms; can be fatal on re-challenge; prevented by HLA-B*5701 screening
Stavudine (d4T)Severe peripheral neuropathy, lipoatrophy, lactic acidosis; largely abandoned
Didanosine (ddI)Pancreatitis, peripheral neuropathy, retinal pigment changes
Lamivudine / EmtricitabineGenerally well tolerated; HBV flare on discontinuation (immune reconstitution)

Key Point on Resistance

  • M184V mutation (in reverse transcriptase): confers high-level resistance to lamivudine and emtricitabine - but also restores ZDV sensitivity and reduces viral fitness
  • TAMs (Thymidine Analogue Mutations): K70R, K219Q, M41L etc. - confer cross-resistance across multiple NRTIs
  • K65R mutation: caused by tenofovir, abacavir; confers multi-NRTI resistance

Source: Goodman & Gilman's The Pharmacological Basis of Therapeutics, Chapter 64 - Antiretroviral Agents

Mechanism of action uses and ADR of third generation cephalosporins in short

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Third-Generation Cephalosporins


Mechanism of Action

Third-generation cephalosporins share the β-lactam mechanism common to all cephalosporins:
  1. Bind to Penicillin-Binding Proteins (PBPs) - specifically transpeptidases on the bacterial cell surface
  2. Inhibit transpeptidation - the final cross-linking step in peptidoglycan cell wall synthesis
  3. The β-lactam ring acylates (inactivates) the transpeptidase by mimicking the D-Ala-D-Ala substrate
  4. With no intact cell wall, bacteria undergo autolysis and osmotic lysis → bactericidal effect
Key distinction from 1st/2nd gen: 3rd gen agents are more resistant to gram-negative β-lactamases and have greater outer membrane penetration in gram-negative organisms, explaining their expanded spectrum.
Note: Cephalosporins do NOT bind essential PBPs in Enterococcus spp. → no activity against enterococci.

Members

DrugRouteKey Feature
CeftriaxoneIV/IMt½ ~8 h → once daily; biliary + renal excretion
CefotaximeIV/IMt½ ~1 h; metabolized to desacetylcefotaxime
CeftazidimeIV/IMAnti-pseudomonal activity (often classified 3rd gen)
CefiximeOralUTI, otitis media, pharyngitis, gonorrhea
CefpodoximeOral (prodrug)Respiratory and urinary tract infections
CefdinirOralCommunity-acquired infections

Uses

1. Meningitis (Major Indication)

  • Bacterial meningitis - N. meningitidis, H. influenzae, penicillin-sensitive S. pneumoniae
  • Ceftriaxone + vancomycin is standard empiric therapy for pneumococcal meningitis (until susceptibilities known)
  • CSF penetration is adequate at therapeutic doses

2. Community-Acquired Pneumonia (CAP)

  • Ceftriaxone or cefotaxime + macrolide is a recommended regimen for hospitalized CAP

3. Gonorrhea

  • IM ceftriaxone 500 mg - current first-line for uncomplicated gonorrhea (dose recently increased due to rising resistance)

4. Septicemia / Gram-negative bacteremia

  • Empiric coverage of Enterobacterales (E. coli, Klebsiella, Proteus)

5. Typhoid fever

  • Ceftriaxone is effective for drug-resistant typhoid

6. Urinary tract infections

  • Cefixime, cefpodoxime for oral outpatient treatment

7. Intra-abdominal / biliary infections

  • Ceftriaxone (biliary excretion makes it useful for biliary tract infections)

8. Otitis media, sinusitis, pharyngitis

  • Oral agents: cefixime, cefdinir, cefpodoxime

9. Pelvic inflammatory disease (PID)

  • IM ceftriaxone as part of combination therapy

10. Lyme disease (disseminated/neurological)

  • Ceftriaxone IV for neuroborreliosis and Lyme carditis

Adverse Drug Reactions (ADRs)

1. Hypersensitivity Reactions (Most Common)

  • Maculopapular rash, urticaria - 1-3% of patients
  • Anaphylaxis (rare, ~0.02%)
  • Cross-reactivity with penicillin: ~1-2% (much lower than historically thought; share β-lactam ring but differ in side chains)
  • Contraindicated in patients with prior anaphylaxis to penicillins

2. GI Effects

  • Nausea, vomiting, diarrhea
  • Ceftriaxone-specific: Pseudolithiasis (biliary sludge/gallstones) - calcium-ceftriaxone precipitates in bile; more common in children; usually reversible on stopping
  • C. difficile-associated diarrhea / colitis - disruption of gut flora

3. Hematological

  • Thrombocytopenia, hemolytic anemia (rare, immune-mediated)
  • Hypoprothrombinemia - especially cephalosporins with N-methylthiotetrazole (NMTT) side chain (cefoperazone) - inhibits vitamin K-dependent clotting factor synthesis; bleeding risk

4. Nephrotoxicity

  • Mild; rarely clinically significant with 3rd gen alone
  • Additive with aminoglycosides

5. Superinfection

  • Prolonged use can select for resistant organisms (Pseudomonas, Enterococcus, fungi)
  • Resistance via inducible AmpC β-lactamases (SPACE organisms: Serratia, Pseudomonas, Acinetobacter, Citrobacter, Enterobacter) - can emerge on therapy

6. Disulfiram-like reaction

  • Only with NMTT-containing agents (e.g., cefoperazone) + alcohol

7. Injection site reactions

  • Pain/phlebitis at IV site; pain at IM injection site

8. Pregnancy / Lactation

  • Generally considered safe in pregnancy (no controlled studies); some excreted in breast milk (may interfere with neonatal sepsis culture results)

Key Resistance Mechanisms

  • ESBLs (Extended Spectrum β-Lactamases) - hydrolyze 3rd gen cephalosporins; common in E. coli, Klebsiella - major clinical problem
  • KPC (Klebsiella pneumoniae Carbapenemase) - confers resistance
  • AmpC β-lactamases (inducible, chromosomal) - SPACE organisms
  • PBP alterations in S. pneumoniae (PBP 1A and 2X mutations) - pneumococcal resistance

Source: Goodman & Gilman's The Pharmacological Basis of Therapeutics, Chapter 58 - The Cephalosporins

ACT prophylaxis

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ACT (Artemisinin-Based Combination Therapy) and Malaria Prophylaxis


Important Distinction: ACT is Primarily for Treatment, NOT Routine Prophylaxis

This is a key pharmacological point. Artemisinin derivatives have very short half-lives (artemisinin ~1-2 h, artemether ~1-2 h, artesunate ~45 min), which makes them unsuitable for chemoprophylaxis in travelers. As stated in Lippincott's: "short half-lives preclude the use of these drugs for prophylaxis."
However, ACTs do feature in specific preventive strategies, discussed below.

Standard Malaria Chemoprophylaxis (Travelers)

These are the WHO/CDC-recommended agents for prophylaxis:
DrugRegionDosing
ChloroquineAreas with chloroquine-sensitive P. falciparum (Central America west of Panama Canal, Haiti, Middle East)500 mg weekly
Atovaquone-proguanil (Malarone)Chloroquine-resistant areas1 tablet daily (250/100 mg)
MefloquineChloroquine-resistant areas250 mg weekly
DoxycyclineMulti-drug resistant areas (Thai border)100 mg daily
PrimaquineP. vivax/P. ovale risk areas (G6PD normal only)30 mg base daily
TafenoquineP. vivax/P. ovale (G6PD normal only)200 mg daily x 3 days, then weekly
Start prophylaxis 1-2 weeks before travel (2 days for doxycycline/Malarone), continue 4 weeks after leaving (1 week for Malarone).

Where ACT Fits in Preventive Strategy

1. Seasonal Malaria Chemoprevention (SMC)

  • WHO-recommended for children under 5 in the Sahel sub-region of Africa during high-transmission months (July-November)
  • Uses sulfadoxine-pyrimethamine + amodiaquine (SP+AQ) - not strictly ACT but combination therapy
  • Dihydroartemisinin-piperaquine (DHA-PPQ) is being studied/used as an ACT for SMC - piperaquine's long t½ (~20 days) provides extended posttreatment prophylaxis, making it well-suited for this purpose

2. Intermittent Preventive Treatment (IPT)

  • IPTp (in pregnancy): Sulfadoxine-pyrimethamine given at each antenatal visit - NOT an ACT (artemisinins avoided in 1st trimester)
  • IPTi (in infants): SP given at time of routine vaccinations

3. Post-Treatment Prophylactic Effect of ACTs

  • DHA-piperaquine specifically offers a period of post-treatment prophylaxis due to piperaquine's long half-life - this is unique among ACTs and makes it preferred in high-transmission settings

4. Standby Emergency Treatment (SBET)

  • Some authorities accept carrying an ACT (e.g., artemether-lumefantrine) as standby emergency self-treatment for travelers to lower-risk remote areas where rapid medical access is unavailable - not a substitute for chemoprophylaxis

Common ACT Regimens (Treatment, not prophylaxis)

ACTComponentsRoute
Artemether-lumefantrine (Coartem)Artemether + lumefantrineOral - first-line uncomplicated falciparum
Artesunate-amodiaquineArtesunate + amodiaquineOral
Artesunate-mefloquineArtesunate + mefloquineOral
Dihydroartemisinin-piperaquine (DHA-PPQ)DHA + piperaquineOral - best post-treatment prophylactic cover
Artesunate IVArtesunateIV - severe malaria (preferred over quinine)

Why ACTs Are Used in Combination

  1. Artemisinin acts rapidly, killing most parasites within 3 days
  2. The partner drug (lumefantrine, piperaquine, mefloquine, amodiaquine) has a longer half-life and clears residual parasites
  3. Combination prevents development of artemisinin resistance - a major global concern, especially in Southeast Asia (partial artemisinin resistance - K13 mutations)

Summary Table: ACT vs. Standard Prophylaxis

FeatureACTStandard Prophylaxis Drugs
Half-lifeVery short (artemisinin component)Long (suited for weekly/daily dosing)
RoleTreatment of active malariaPrevention before/during/after travel
Use in preventionSMC, SBET, post-treatment cover (DHA-PPQ)Routine traveler prophylaxis
Key resistance concernK13 mutations (partial resistance)Chloroquine resistance widespread

Sources: Harrison's Principles of Internal Medicine 22E; Lippincott Illustrated Reviews Pharmacology; Katzung's Basic and Clinical Pharmacology 16th Edition; Goldman-Cecil Medicine

Mechanism of action uses and ADR of chloroquine

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Chloroquine


Mechanism of Action

Chloroquine is a synthetic 4-aminoquinoline weak diprotic base. It has two distinct mechanisms:

1. Antimalarial MOA - Heme Polymerization Inhibition

Step-by-step:
  1. Chloroquine enters the parasite-infected red blood cell and concentrates in the acidic food vacuole of the Plasmodium parasite via ion trapping (the weak base becomes protonated and trapped in the acidic environment)
  2. Inside the food vacuole, the parasite digests host hemoglobin to extract amino acids - this releases large amounts of free heme (ferriprotoporphyrin IX), which is toxic to the parasite
  3. Normally, the parasite protects itself by polymerizing free heme into hemozoin (an insoluble, non-toxic "malaria pigment")
  4. Chloroquine binds to free heme and blocks its polymerization into hemozoin
  5. The resulting accumulation of free heme + raised vacuolar pH causes oxidative membrane damage → lysis of both parasite and RBC
Chloroquine is a blood schizonticide - it acts on the erythrocytic (asexual intraerythrocytic) stage only. It has NO reliable activity against liver stage parasites (hypnozoites) or gametocytes.
Resistance mechanism: Chloroquine-resistant P. falciparum strains carry mutations in PfCRT (Plasmodium falciparum chloroquine-resistance transporter) - a putative transporter protein that actively pumps chloroquine out of the food vacuole, preventing its accumulation. Can be partially reversed by verapamil, desipramine (no established clinical use).

2. Immunomodulatory MOA (for rheumatic diseases)

  • Chloroquine and hydroxychloroquine accumulate in lysosomes of immune cells (macrophages, dendritic cells)
  • Raises lysosomal/endosomal pH → inhibits antigen processing and presentation
  • Suppresses Toll-like receptor (TLR) signaling (TLR7, TLR9) by preventing acidification needed for TLR activation
  • Reduces production of pro-inflammatory cytokines (IL-1, IL-6, TNF-α)
  • Net effect: broad anti-inflammatory and immunomodulatory activity

Pharmacokinetics

  • Absorption: Rapidly and almost completely absorbed orally; peak plasma in ~3 hours
  • Distribution: Extremely large Vd (100-1000 L/kg); concentrates in erythrocytes, liver, spleen, kidney, lung, melanin-containing tissues (retina, skin), leukocytes
  • Half-life: Initial t½ 3-5 days; terminal t½ 1-2 months (due to slow release from tissues) - allows once-weekly dosing for prophylaxis
  • Metabolism: Hepatic dealkylation (CYP enzymes); metabolites retain some antimalarial activity
  • Excretion: Predominantly renal

Uses

Antimalarial Uses

IndicationDetails
Treatment of uncomplicated malariaDrug of choice for chloroquine-sensitive P. falciparum, P. vivax, P. malariae, P. ovale, P. knowlesi - rapidly clears fever (24-48 h) and parasitemia (48-72 h)
Malaria prophylaxis (travelers)Preferred agent for travel to chloroquine-sensitive regions (Central America west of Panama Canal, Haiti, parts of Middle East); 500 mg weekly, start 1-2 weeks before, continue 4 weeks after
Radical cure of P. vivax/P. ovaleMust add primaquine or tafenoquine - chloroquine alone does NOT clear dormant hypnozoites in liver
Limitation: Resistance in P. falciparum is now widespread (almost all endemic areas) - replaced by ACTs in most regions. P. vivax resistance emerging in Indonesia and Papua New Guinea.

Non-Malarial Uses

IndicationNotes
Rheumatoid arthritisDMARD; modest efficacy; hydroxychloroquine preferred
Systemic lupus erythematosus (SLE)Reduces flares, prevents organ damage, safe in pregnancy; hydroxychloroquine is standard
Extraintestinal / amebic liver abscessHigh liver concentrations; used if metronidazole fails
Discoid lupus, dermatomyositisSkin manifestations

Adverse Drug Reactions (ADRs)

At Prophylactic / Low Doses (generally well tolerated)

ADRNotes
PruritusCommon, especially in patients of African ancestry; responds to antihistamines
GI upsetNausea, vomiting, abdominal pain, anorexia - reduced by taking with food
Headache, dizzinessMild, common
Blurred visionUsually reversible at low doses

At Higher / Prolonged Doses (rheumatic disease doses)

ADRNotes
Retinopathy (most serious)Irreversible bull's-eye maculopathy; dose and duration dependent; hydroxychloroquine safer; requires annual ophthalmologic monitoring after 5 years
OtotoxicityIrreversible sensorineural hearing loss; rare
Myopathy / CardiomyopathyVacuolar myopathy; can affect cardiac conduction
Peripheral neuropathyRare with long-term high-dose use
QT prolongationRisk of arrhythmia; avoid with other QT-prolonging drugs
NeuropsychiatricConfusion, psychosis, seizures (rare)
HemolysisIn G6PD-deficient patients
AgranulocytosisRare
Bleaching of hair / nail/skin discolorationChronic use

Acute Overdose (Medical Emergency)

  • As little as 5 g can be fatal in adults
  • Cardiovascular: severe hypotension, cardiac arrhythmias, respiratory and cardiac arrest
  • IV/IM administration → severe hypotension; must be avoided
  • Treatment: mechanical ventilation, anticonvulsants, vasopressors

Contraindications

  • Psoriasis - may precipitate severe exacerbation
  • Porphyria - may trigger acute attack
  • Pre-existing retinal or visual field abnormalities
  • Pre-existing myopathy
  • Caution: hepatic disease, neurologic disorders, hematologic disorders, G6PD deficiency
Safe in pregnancy and in young children at recommended doses.

Sources: Katzung's Basic & Clinical Pharmacology 16th Ed.; Lippincott Illustrated Reviews Pharmacology; Goldman-Cecil Medicine
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