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Antibiotics: A Medical Student's Guide


1. Key Terminology

Before diving into classes, these definitions from Medical Microbiology 9e are foundational:
TermDefinition
BacteriostaticInhibits bacterial growth but does not kill (e.g., tetracyclines, macrolides, sulfonamides)
BactericidalKills bacteria (e.g., beta-lactams, fluoroquinolones, aminoglycosides)
MIC (Minimum Inhibitory Concentration)Lowest drug concentration that inhibits visible bacterial growth
MBC (Minimum Bactericidal Concentration)Lowest drug concentration that kills ≥99.9% of organisms
Broad-spectrumActive against both gram-positive and gram-negative bacteria
Narrow-spectrumActive against a limited range of organisms
SynergismTwo antibiotics together have enhanced activity vs. either alone (classic example: beta-lactam + aminoglycoside for enterococcal endocarditis)
AntagonismOne drug interferes with the activity of another
- Medical Microbiology 9e, Box 17.1

2. Classification by Mechanism of Action

The table below follows the structure in Medical Microbiology 9e (Table 17.1) and the Family Medicine textbook (Table 15-2):

A. Cell Wall Synthesis Inhibitors

The most common mechanism. Bacteria have a peptidoglycan layer - antibiotics in this class disrupt its assembly, triggering autolysins that degrade the wall. These agents are generally bactericidal.

Beta-Lactams

All share a beta-lactam ring. They bind penicillin-binding proteins (PBPs) - transpeptidases, transglycosylases, and carboxypeptidases - and block peptidoglycan cross-linking.
SubclassAgentsKey Spectrum
PenicillinsPenicillin G/V, amoxicillin, ampicillin, nafcillin, oxacillin, piperacillinStrep, some gram-negatives; antistaphylococcal for nafcillin/oxacillin
BLI combinationsAmoxicillin-clavulanate, piperacillin-tazobactam, ampicillin-sulbactamExtended gram-negative coverage + ESBL producers
1st-gen cephalosporinsCephalexin, cefazolinGram-positives, basic gram-negatives (E. coli, Klebsiella, Proteus)
2nd-gen cephalosporinsCefuroxime, cefoxitinPlus Haemophilus, some anaerobes (cefoxitin)
3rd-gen cephalosporinsCeftriaxone, cefotaxime, ceftazidimeExpanded gram-negatives; ceftazidime covers Pseudomonas
4th-gen cephalosporinsCefepimeBroad including Pseudomonas
5th-gen cephalosporinsCeftarolineCovers MRSA
CarbapenemsImipenem, meropenem, ertapenem, doripenemBroadest spectrum - last resort for MDR gram-negatives
MonobactamsAztreonamGram-negatives only; safe in penicillin allergy
- Medical Microbiology 9e; Textbook of Family Medicine 9e, Table 15-2

Glycopeptides

Bind D-Ala-D-Ala terminus of peptidoglycan precursors - steric hindrance prevents cell wall assembly. Not absorbed orally (except for C. diff treatment with vancomycin PO).
  • Vancomycin - gram-positive coverage including MRSA
  • Teicoplanin - similar spectrum, long half-life (45-70 hrs), IM/IV use
- Goodman & Gilman's; Katzung's Basic and Clinical Pharmacology 16e

Others in this class

  • Daptomycin - cyclic lipopeptide; disrupts cell membrane (gram-positives, MRSA, VRE)
  • Bacitracin - topical; blocks lipid carrier in cell wall synthesis
  • Isoniazid, ethambutol, cycloserine - target mycobacterial cell wall components

B. Protein Synthesis Inhibitors

These target bacterial ribosomes (70S = 30S + 50S subunits) - they exploit the difference from eukaryotic 80S ribosomes.
ClassTargetExamplesBacteriostatic/cidal
Aminoglycosides30S (blocks initiation, misreading)Gentamicin, tobramycin, amikacin, streptomycinCidal
Tetracyclines30S (blocks aminoacyl-tRNA binding)Tetracycline, doxycycline, minocyclineStatic
Macrolides50S (blocks translocation)Azithromycin, clarithromycin, erythromycinStatic
Clindamycin50S (blocks translocation)ClindamycinStatic
Chloramphenicol50S (blocks peptidyl transferase)ChloramphenicolStatic
Oxazolidinones50S (blocks initiation complex)LinezolidStatic
Streptogramins50SQuinupristin-dalfopristinCidal (combined)
Mnemonic: "Buy AT 30, CELS at 50"
  • 30S: B = beta-lactams (indirectly), A = Aminoglycosides, T = Tetracyclines
  • 50S: C = Chloramphenicol, E = Erythromycin (macrolides), L = Lincosamides (clindamycin), S = Streptogramins
- Medical Microbiology 9e, Table 17.1

C. DNA / Nucleic Acid Synthesis Inhibitors

ClassMechanismExamples
FluoroquinolonesInhibit DNA gyrase (gram-neg) and topoisomerase IV (gram-pos)Ciprofloxacin, levofloxacin, moxifloxacin
SulfonamidesBlock dihydropteroate synthase (folate synthesis)Sulfamethoxazole
TrimethoprimBlocks dihydrofolate reductaseTMP; combined with SMX = TMP-SMX
MetronidazoleFree radical DNA strand breaks (anaerobes/protozoa)Metronidazole
RifamycinsInhibit bacterial RNA polymeraseRifampin, rifabutin
NitrofurantoinMultiple DNA damage mechanismsNitrofurantoin (urinary only)
Fluoroquinolones and metronidazole are nearly 100% orally bioavailable - IV is rarely needed unless enteral route is unavailable. - Textbook of Family Medicine 9e

3. Types of Antimicrobial Therapy

Three therapeutic approaches exist in clinical practice:
  1. Empiric (Presumptive) - Started before culture results, based on likely pathogens and local resistance patterns. The clinical syndrome should be defined as accurately as possible; severity and comorbidities inform whether to use broad or narrow coverage.
  2. Targeted (Precise) - Narrowed to specific organism(s) once culture and sensitivity results return (usually 48-72 hrs). De-escalation - switching to a narrower-spectrum agent once the pathogen is identified - is preferred. Broad unnecessary coverage predisposes to colonization by drug-resistant organisms and C. difficile colitis.
  3. Prophylactic (Preventive) - Given before procedures or in defined high-risk settings. Most effective when administered within 1 hour of a planned invasive procedure.
- Textbook of Family Medicine 9e

4. Antibiotic Resistance

Resistance began in the 1940s, shortly after penicillin entered clinical use, when S. aureus developed resistance. Today, ~50% of S. aureus is methicillin resistant (MRSA). - Current Surgical Therapy 14e

Four Main Mechanisms of Resistance

  1. Limiting uptake - Altered porin proteins in gram-negative outer membranes reduce drug entry (important for beta-lactams in Pseudomonas)
  2. Target modification - Altered PBPs (e.g., MRSA's PBP2a encoded by mecA gene) don't bind beta-lactams; ribosomal methylation (ermB gene) confers macrolide resistance in pneumococci
  3. Enzymatic inactivation - Beta-lactamases hydrolyze the beta-lactam ring. Over 200 types are known:
    • Class A: Penicillinases (TEM-1, SHV-1); mutations create ESBLs that inactivate all penicillins + cephalosporins
    • KPC (Klebsiella Pneumoniae Carbapenemase): Serine carbapenemase - confers resistance to ALL beta-lactams; treat with ceftazidime-avibactam or meropenem-vaborbactam
    • MBL (Metallo-beta-lactamases): Require zinc; resistant to avibactam (use aztreonam combinations)
  4. Active efflux - Membrane pumps export drugs before they reach their target; major mechanism in Pseudomonas and for macrolide resistance (mefA gene in pneumococcus)
- Medical Microbiology 9e; Current Surgical Therapy 14e; Harrison's 22e

Key Resistant Organisms to Know

OrganismResistanceTreatment
MRSAmecA → PBP2aVancomycin, daptomycin, linezolid, ceftaroline
VREvanA/B genesLinezolid, daptomycin
ESBL producersExtended-spectrum β-lactamaseCarbapenems; ceftazidime-avibactam
KPC producersCarbapenemase (serine)Ceftazidime-avibactam, meropenem-vaborbactam
MRSA (community, CA-MRSA)Smaller SCC mec (IV/V); more virulentOften susceptible to clindamycin and TMP-SMX
- Current Surgical Therapy 14e

5. Antibiotic Stewardship

Stewardship is the systematic effort to optimize antibiotic use to:
  • Improve patient outcomes
  • Reduce adverse effects (C. diff, nephrotoxicity, drug reactions)
  • Slow the emergence and spread of resistance
A 2025 systematic review in Clin Infect Dis (PMID: 39657007) found that audit-and-feedback interventions for antibiotic prescribing in primary care significantly reduce inappropriate antibiotic use.
Core stewardship principles:
  • Use the narrowest-spectrum effective agent
  • De-escalate when cultures return
  • Prescribe correct dose and duration
  • Avoid antibiotics for viral infections
  • Check local susceptibility patterns (antibiograms)

6. Quick Clinical Recall Summary

MECHANISM
├── Cell Wall       → β-lactams, vancomycin, daptomycin
├── 30S Ribosome    → Aminoglycosides, Tetracyclines
├── 50S Ribosome    → Macrolides, Clindamycin, Chloramphenicol, Linezolid
├── DNA gyrase      → Fluoroquinolones
├── Folate pathway  → Sulfonamides, Trimethoprim
└── RNA polymerase  → Rifampin

BACTERICIDAL: β-lactams, Aminoglycosides, Fluoroquinolones, Vancomycin, Metronidazole
BACTERIOSTATIC: Tetracyclines, Macrolides, Clindamycin, Linezolid, Sulfonamides

Sources:
  • Medical Microbiology 9e - Mechanisms of action, resistance, Table 17.1
  • Harrison's Principles of Internal Medicine 22e (2025) - Resistance, pneumococcal susceptibility breakpoints
  • Textbook of Family Medicine 9e - Empiric/targeted/prophylactic therapy, Table 15-2
  • Current Surgical Therapy 14e - MRSA, beta-lactamase classification, resistant organisms
  • Goodman & Gilman's Pharmacological Basis of Therapeutics - Glycopeptides
  • Katzung's Basic and Clinical Pharmacology 16e - Teicoplanin
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