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Hantavirus - Complete Clinical Overview
Classification & Virology
Hantaviruses are enveloped, single-stranded RNA viruses belonging to the family Hantaviridae (formerly order Bunyavirales). They have a tripartite genome (S, M, and L segments) and are maintained in nature through chronic, asymptomatic infection of rodent reservoir hosts.
Clinical Syndromes
Hantaviruses produce two distinct syndromes depending on the viral species:
| Feature | HPS (Hantavirus Pulmonary Syndrome) | HFRS (Hemorrhagic Fever with Renal Syndrome) |
|---|
| Also called | HCPS (cardiopulmonary) | Korean hemorrhagic fever, nephropathia epidemica |
| Geography | Americas | Europe, Asia, worldwide |
| Key organ | Lungs | Kidneys |
| Mortality | 30-40% | 1-15% depending on species |
| Main virus | Sin Nombre, Andes | Hantaan, Seoul, Puumala, Dobrava |
Causative Viruses
New World (HPS):
- Sin Nombre virus (SNV) - major cause of HPS in western/central United States; reservoir = deer mouse (Peromyscus maniculatus)
- Andes virus - endemic to Argentina and Chile; reservoir = long-tailed rice rat (Oligoryzomys longicaudatus) - the only hantavirus capable of person-to-person transmission
- Bayou, Black Creek Canal, Monongahela, New York viruses - sporadic US cases
- Laguna Negra, Choclo viruses - South/Central America
Old World (HFRS):
- Hantaan virus - severe HFRS; Far East Asia
- Seoul virus - mild-moderate HFRS; worldwide (carried by domestic rats)
- Puumala virus - mild nephropathia epidemica; Europe
- Dobrava virus - Balkans
Transmission
- Primary route: Inhalation of aerosolized rodent urine, droppings, or saliva
- Other routes: Direct contact with infected rodents, rodent bites, contamination of broken skin
- Person-to-person: Documented ONLY for Andes virus (rare; requires prolonged close contact)
- High-risk activities: cleaning rodent-infested buildings, trapping rodents, hand plowing, sleeping in rodent-infested structures, camping
Rodents carry lifelong asymptomatic infection with prolonged viruria. Heavier rainfall increases rodent food supplies, expanding rodent populations and risk of human contact. Most cases occur spring-summer.
- Red Book 2021, p. 585-586
Hantavirus Pulmonary Syndrome (HPS) - Clinical Course
Incubation Period
1-6 weeks (average ~2-3 weeks)
Phase 1 - Prodrome (3-7 days)
- Fever, chills, headache, severe myalgia
- Nausea, vomiting, diarrhea, dizziness
- Occasional cough
- No respiratory symptoms yet - this commonly delays diagnosis
Phase 2 - Cardiopulmonary (abrupt onset)
- Sudden onset of cough and dyspnea
- Noncardiogenic pulmonary edema with bilateral interstitial and alveolar infiltrates
- Pleural effusions due to diffuse pulmonary capillary leak
- Severe hypoxemia - intubation and mechanical ventilation typically needed for 2-4 days
- Myocardial depression: low cardiac indices, low stroke volume, normal pulmonary wedge pressure, increased systemic vascular resistance - distinct from septic shock
- Hypotension, shock
Recovery
Heralded by onset of diuresis with rapid clinical improvement thereafter.
Poor Prognostic Indicators
-
Persistent hypotension
-
Marked hemoconcentration
-
Cardiac index < 2
-
Abrupt lactic acidosis with serum lactate > 4 mmol/L (36 mg/dL)
-
Red Book 2021, p. 585
Laboratory Findings
| Finding | Significance |
|---|
| Thrombocytopenia | Classic early finding |
| Neutrophilic leukocytosis with left shift | Immature granulocytes |
| >10% immunoblasts (basophilic cytoplasm, prominent nucleoli) | Highly characteristic |
| Elevated hematocrit (hemoconcentration) | Capillary leak |
| Elevated lactate | Poor prognosis |
5-Point Peripheral Blood Screen for HPS
HPS should be considered when thrombocytopenia + severe ARDS-like pneumonia occur together. The 5-point screen (used in endemic areas) includes:
- Hemoglobin elevated for gender/age
- Left shift of granulocytic series
- Absence of toxic changes
- Thrombocytopenia
- Immunoblasts and plasma cells > 10% of lymphocytes
4 of 5 criteria = positive predictive value >90%
Diagnosis
-
Serology (method of choice): Hantavirus-specific IgM and IgG - often present at disease onset. Note: IgG may be negative in rapidly fatal cases. Positive IgM results should be confirmed by CDC (Viral Special Pathogens Branch: 470-312-0094).
-
Molecular (PCR): Detects virus in peripheral blood mononuclear cells during early disease; not reliably present in BAL fluid
-
Viral culture: Not clinically useful
-
Immunohistochemistry: Can establish diagnosis at autopsy (pulmonary capillary endothelial cells)
-
Red Book 2021, p. 586
Treatment
No specific antiviral is approved. Management is entirely supportive:
- Immediate transfer to a tertiary care facility capable of managing respiratory failure and shock
- Mechanical ventilation for respiratory failure
- Inotropic and pressor support for myocardial depression
- ECMO should be considered when pulmonary wedge pressure and cardiac indices have deteriorated - provides short-term support for the severe capillary leak syndrome
Ribavirin: Active in vitro against hantaviruses including SNV, but two clinical studies (one open-label, one RCT) failed to show benefit in treatment of HPS during the cardiopulmonary stage. Ribavirin is not standard of care.
Cytokine-blocking agents are theoretically possible but not systematically evaluated. Broad-spectrum antibiotics are often given until bacterial sepsis is excluded (bacterial shock is far more common).
Isolation Precautions
- Standard precautions in US hospitals
- Person-to-person HPS transmission not reported in the US
- Andes virus - has caused nosocomial transmission in Argentina and Chile; contact and droplet precautions warranted
Epidemiology
- ~20-40 HPS cases/year in the US; >95% west of the Mississippi River
- Over 800 total US cases reported since 1993 (Sin Nombre virus); ~1/3 fatal
- Cases in children under 10 are exceedingly rare
- American Indian/Alaska Native populations bear disproportionate burden (case fatality ~46% vs. lower in non-Native populations)
- Notable outbreak: 2012 Yosemite National Park (rodent-infested cabins)
- 2025: PAHO reported 229 HPS cases with 59 deaths across 8 Americas countries (25.7% CFR) - an increase in lethality noted in Southern Cone
🚨 Active 2026 Outbreak: Andes Virus on M/V Hondius Cruise Ship
This is directly relevant to current clinical awareness:
- May 2, 2026: WHO notified of a cluster of severe acute respiratory illness aboard the Dutch-flagged cruise ship M/V Hondius in the Atlantic Ocean
- Confirmed cause: Andes virus (confirmed by PCR in South Africa)
- Index cases had traveled in Argentina and South America before boarding April 1, 2026
- As of May 18, 2026: 10 cases (8 confirmed), 3 deaths
- Illness: fever, gastrointestinal symptoms, rapid progression to pneumonia, ARDS, and shock
- Contact tracing underway across UK, South Africa, and US
- No confirmed US cases as of May 18 - risk to general US public considered extremely low
- The CDC issued a HAN Health Update (May 15, 2026) informing clinicians about Andes virus testing
- Key point for clinicians: Andes virus is the ONLY hantavirus with person-to-person transmission - consider in any patient with HPS-like illness and recent travel to South America or contact with cruise ship passengers
Prevention
- Seal rodent entry points in buildings
- Use N95 respirator when working in potentially rodent-infested enclosed spaces
- Wet-clean (don't dry-sweep) rodent droppings with dilute bleach before removing
- Avoid direct contact with rodents; use gloves when handling
- Keep campsites/cabins clean; avoid sleeping on bare ground
Sources: Red Book 2021 (AAP Committee on Infectious Diseases), p. 585-587 |
Harrison's Principles of Internal Medicine 22e (2025) |
WHO Disease Outbreak News DON599, May 2026 |
CDC HAN Update #529, May 2026 |
PAHO Epidemiological Alert, December 2025