Aki bio markers and relevance
"acute kidney injury"[MeSH Terms] AND "biomarkers"[MeSH Terms]
| Biomarker | Type | Source | Timing vs. Creatinine | Key Relevance |
|---|---|---|---|---|
| Cystatin C | Filtration | All nucleated cells (blood) | Variable | GFR estimation; subclinical AKI |
| penKid | Filtration | Enkephalin precursor (blood) | Early | Subclinical AKI in critical illness |
| KIM-1 | Tubular damage | Proximal tubule (urine) | Hours earlier | Specific for kidney; nephrotoxin detection |
| NGAL | Tubular stress | Renal epithelium (urine/plasma) | 2-6 h, 1-3 days earlier | Most sensitive early marker; limited specificity in sepsis |
| IL-18 | Tubular stress | Proximal tubule (urine) | 1-2 days earlier | Predicts mortality; distinguishes ATN from prerenal |
| L-FABP | Tubular stress | Proximal tubule (urine) | 24-72 h earlier | Contrast nephropathy; transplantation |
| TIMP-2 x IGFBP-7 | G1 cell arrest | Renal tubular cells (urine) | Up to 12 h ahead | Only FDA-cleared test; risk stratification, ICU/cardiac surgery |
| NAG/GST | Tubular enzymes | Tubular cells (urine) | Early | Injury localization; limited clinical utility |
| Beta-2-microglobulin, Alpha-1-MG | Tubular dysfunction | Filtered proteins (urine) | Concurrent | Tubular proteinuria pattern; caution with tranexamic acid |
Procalcitonin
"procalcitonin"[MeSH Terms] AND "antibiotic stewardship"[MeSH Terms]
"procalcitonin"[MeSH Terms] AND "sepsis"[MeSH Terms]
| Stimulus | Effect on PCT |
|---|---|
| Bacterial toxins (e.g., lipopolysaccharide / endotoxin) | Strong upregulation |
| Pro-inflammatory cytokines (TNF-alpha, IL-1beta) | Strong upregulation |
| Viral infections | Minimal or no rise |
| Interferon-gamma (IFN-γ) | Attenuates PCT release - explains why viral infections cause low PCT |
| Appropriate antibiotic therapy | Rapid fall within 24-72 hours |
| PCT Level | Interpretation |
|---|---|
| < 0.1 ng/mL | Normal; infection very unlikely |
| ≤ 0.2 ng/mL | Useful threshold to exclude sepsis / systemic inflammation |
| 0.1-0.5 ng/mL | Low-grade systemic inflammatory response; mild infection possible |
| ≥ 0.5 ng/mL | Abnormal; suggests sepsis / systemic bacterial infection |
| > 2 ng/mL | Severe sepsis likely |
| > 10 ng/mL | High likelihood of septic shock / bacteremia |
| Up to > 100 ng/mL | Massive systemic bacterial infection |
| Feature | PCT | CRP |
|---|---|---|
| Rise after bacterial infection | 4-6 hours | 12-24 hours |
| Peak | 24-48 hours | 48-72 hours |
| Half-life | ~24 hours | ~19 hours |
| Viral infection response | Minimal | Moderate-high |
| Specificity for bacterial infection | Higher | Lower |
| Fall with appropriate antibiotics | Rapid | Slower |
| Non-infectious inflammation | Typically low | Commonly elevated |
| Autoimmune flare | Usually not elevated | Commonly elevated |
| Use for stopping antibiotics | Strong evidence | Less established |
fungal
"invasive fungal infection"[MeSH Terms] AND "biomarkers"[MeSH Terms]
"galactomannan"[MeSH Terms] AND "aspergillosis"[MeSH Terms]
"beta glucan" AND "invasive fungal" AND diagnosis
invasive aspergillosis diagnosis galactomannan
| Result | BDG level |
|---|---|
| Negative | < 60 pg/mL |
| Indeterminate | 60-79 pg/mL |
| Positive | ≥ 80 pg/mL |
| Cause | Mechanism |
|---|---|
| Haemodialysis with cellulose membranes | Glucan-containing membranes |
| Intravenous albumin | Preparation contains BDG |
| IV immunoglobulin (IVIG) | Can persist > 2 weeks after infusion |
| Older piperacillin/tazobactam formulations | Residual galactomannan AND glucan |
| Bacteraemia (some Gram-positives) | Non-specific activation |
| Surgical gauze exposure (laparotomy) | Cotton-derived glucan |
| Specimen | Performance | Best population |
|---|---|---|
| Serum GM | Moderate sensitivity | Haematology/HSCT patients who are neutropenic and NOT on mould-active prophylaxis |
| Serum GM | Poor sensitivity | Solid organ transplant recipients, non-neutropenic patients, chronic pulmonary aspergillosis |
| BAL GM | Higher sensitivity | Any immunocompromised patient with suspected IPA; maintains higher performance even in those on prophylaxis |
| BAL GM (lung transplant) | Cannot distinguish colonisation from invasion | Not reliable alone |
| CSF GM | Emerging | CNS aspergillosis - a 2024 meta-analysis (Komorowski et al., PMID 38810927) validated CSF GM for CNS aspergillosis diagnosis |
| Cause | Note |
|---|---|
| Piperacillin/tazobactam (older formulations) | Residual GM in the drug preparation; FDA still requires labs to notify physicians |
| Cross-reactivity with other fungi | Paecilomyces, Penicillium, Fusarium, Histoplasma |
| Some food-derived antigens | Particularly rice-based products given to neonates |
| Other beta-lactam antibiotics | Some reported |
| Test | Organism | Specimen | Use |
|---|---|---|---|
| Blastomyces antigen | Blastomyces dermatitidis | Urine / serum | Disseminated / pulmonary blastomycosis |
| Paracoccidioides antigen | Paracoccidioides brasiliensis | Serum | Paracoccidioidomycosis |
| Talaromyces (formerly Penicillium) antigen | Talaromyces marneffei | Serum/urine | Disseminated talaromycosis (SE Asia/HIV) |
| Biomarker | Target organism(s) | Sample | Key strength | Key limitation |
|---|---|---|---|---|
| BDG | Most fungi (not Mucor/Crypto) | Serum, BAL, CSF | Broad coverage; high NPV for PCP | Many false positives; not mucormycosis |
| Galactomannan | Aspergillus | Serum, BAL | Precedes symptoms by days; BAL superior | Suppressed by antifungals; poor in non-neutropenics |
| CrAg LFA | Cryptococcus | Serum, CSF | POC test in 10 min; quantitative titre | Only for Cryptococcus |
| Histoplasma Ag | Histoplasma | Urine, serum, BAL | 90% sensitivity in disseminated disease | Cross-reacts with Blasto/Paracocci |
| Aspergillus IgG/precipitins | Aspergillus | Serum | Chronic & allergic aspergillosis | Not for acute invasive disease |
| Aspergillus-specific IgE | Aspergillus | Serum | ABPA diagnosis | Allergic disease only |
| PCR | Aspergillus, others | Blood, BAL, sputum | Rapid; sensitive; detects resistance genes | Standardisation issues |
| mNGS | Any organism | Blood, tissue, BAL | Hypothesis-free broad detection | Cost; interpretation; turnaround time |