Excellent data gathered. Here is the comprehensive breakdown:
MDS/MPN Overlap Neoplasms - Classification, Morphology & Molecular
Overview
MDS/MPN overlap neoplasms are clonal myeloid disorders that simultaneously harbor dysplastic features (ineffective hematopoiesis, cytopenias) AND proliferative features (elevated cell counts, organomegaly). They sit between pure MDS and pure MPN, making diagnosis challenging.
WHO 2022 and ICC 2022 recognize the same core entities but with some structural differences. A key 2022 change: JMML is moved out of the MDS/MPN category into a separate pediatric/germline-associated group (though it is still discussed here for completeness).
Entities at a Glance
| Entity | WHO 2022 Name | ICC 2022 Name | Defining Feature |
|---|
| CMML | CMML | CMML | Persistent monocytosis |
| aCML | MDS/MPN with neutrophilia | aCML, BCR-ABL1-negative | Neutrophilia + dysgranulopoiesis |
| MDS/MPN-RS-T | MDS/MPN-SF3B1-T | MDS/MPN-SF3B1-T or MDS/MPN-RS-T-NOS | Ring sideroblasts + thrombocytosis |
| JMML | (moved to pediatric category) | JMML | Pediatric; RAS pathway mutations |
| MDS/MPN-NOS | MDS/MPN-NOS | MDS/MPN-NOS | Overlap features, none of the above |
Note: WHO 2022 renamed MDS/MPN-RS-T to MDS/MPN-SF3B1-T for SF3B1-mutated cases, reflecting the same molecular-first shift seen in MDS.
1. Chronic Myelomonocytic Leukemia (CMML)
The most common MDS/MPN entity - incidence ~0.6 per 100,000/year; median age 73-75; male predominance.
Diagnostic Criteria
| Criterion | Threshold |
|---|
| Peripheral blood monocytosis | ≥0.5 × 10⁹/L AND ≥10% of WBC differential |
| Blasts (PB + BM) | <20% (including promonocytes) |
| Philadelphia chromosome / BCR-ABL1 | Absent |
| PDGFRA, PDGFRB, FGFR1, PCM1-JAK2 rearrangements | Absent (if eosinophilia present, must exclude) |
| Dysplasia | ≥1 myeloid lineage (or clonal cytogenetic/molecular abnormality) |
Blast-Based Subclassification
| Subtype | PB Blasts | BM Blasts |
|---|
| CMML-0 | <2% | <5% |
| CMML-1 | 2-4% | 5-9% |
| CMML-2 | 5-19% | 10-19%, or Auer rods present |
WHO 2022 note: CMML-0 and CMML-1 have virtually identical prognosis; the distinction is retained but debated.
Morphology
- Peripheral blood: increased monocytes with mildly atypical morphology - irregular nuclear contours, finely convoluted/cerebriform nuclei, abnormal granularity
- Promonocytes counted as blasts (nuclear folds, delicate chromatin, gray cytoplasm)
- Granulocytic dysplasia: pseudo-Pelger-Huet cells, hypogranularity
- Bone marrow: hypercellular with monocytic proliferation and granulocytic dysplasia
- May have plasmacytoid monocyte clusters (CD14+, CD68+, CD56+, CD4+, CD2+, CD5+)
CMML - peripheral blood showing increased absolute monocytes with mild atypia
Immunophenotype
- CD13+, CD33+, variable CD14/CD68/CD64/CD4
Molecular Features
| Gene | Frequency | Notes |
|---|
| TET2 | 40-60% | Most common; epigenetic (DNA methylation) |
| SRSF2 | 40-50% | RNA splicing; co-mutation with TET2 highly specific for CMML phenotype |
| ASXL1 | 40-50% | Histone modification; adverse prognosis |
| RUNX1 | 15-20% | Transcription factor |
| SETBP1 | ~40% | Poor prognosis |
| NRAS/KRAS | 10-20% | RAS/MAPK signaling |
| EZH2 | 5-10% | Histone modification |
| JAK2 | 5-10% | |
| SF3B1, U2AF1 | 1-10% | Splicing |
| IDH1/IDH2, FLT3, TP53 | 1-10% | AML transformation risk |
Key diagnostic pearl: Co-mutation of TET2 + SRSF2 is highly characteristic of CMML and can support the diagnosis even when morphologic dysplasia is not definitive. TET2, SRSF2, or ASXL1 mutations occur in >80% of CMML cases.
Cytogenetics: Abnormal in 20-40% - most common: +8, -7/del(7q), del(12p).
Prognosis: Median survival 20-30 months; AML transformation in 15-30%.
2. Atypical CML, BCR-ABL1-Negative (aCML) / MDS/MPN with Neutrophilia
Rare entity with predominantly neutrophilic leukocytosis + dysgranulopoiesis, no Philadelphia chromosome.
Diagnostic Criteria
| Criterion | Value |
|---|
| Leukocytosis | WBC ≥13 × 10⁹/L |
| Neutrophil precursors (promyelocytes + myelocytes + metamyelocytes) | ≥10% of WBCs |
| Dysgranulopoiesis | Prominent (required) |
| Monocytes | <10% of WBCs (distinguishes from CMML) |
| Basophils | <2% (distinguishes from CML) |
| BCR-ABL1 / Ph chromosome | Absent |
| PDGFRA, PDGFRB, FGFR1, PCM1-JAK2 | Absent |
| Blasts | <20% |
Morphology
- Marked granulocytic hyperplasia with dysgranulopoiesis (abnormal granules, abnormal nuclear segmentation)
- Dysplasia in erythroid and megakaryocytic lineages may also be present
- Bone marrow: hypercellular with granulocytic proliferation
- Variant: "syndrome of abnormal chromatin clumping" - exaggerated chromatin condensation
Molecular Features
| Gene | Frequency | Notes |
|---|
| SETBP1 | ~25% | Most characteristic mutation; poor prognosis |
| ETNK1 | ~15% | Relatively specific, newly identified |
| JAK2 V617F | Some cases | |
| CSF3R | Controversial overlap with CNL | |
| ASXL1, TET2 | Variable | |
Cytogenetics: Abnormal in up to 80% - +8, +13, del(20q), i(17q), del(12p).
Prognosis: Median survival ~20 months; AML transformation 25-40%.
3. MDS/MPN with SF3B1 Mutation and Thrombocytosis (MDS/MPN-SF3B1-T)
Formerly MDS/MPN with Ring Sideroblasts and Thrombocytosis (MDS/MPN-RS-T). WHO 2022 renamed this to reflect the molecular driver.
Diagnostic Criteria
| Criterion | Value |
|---|
| Ring sideroblasts | ≥15% of erythroid precursors (or ≥5% if SF3B1 mutated) |
| Thrombocytosis | Platelets ≥450 × 10⁹/L (persistent) |
| Anemia | Present |
| Blasts | <5% BM, <1% PB |
| SF3B1 mutation | Present in most cases (required for "SF3B1-T" designation) |
| No del(5q), -7/del(7q), or inv(3)/t(3;3) | Absent |
| BCR-ABL1, PDGFR rearrangements | Absent |
Molecular Features
| Gene | Notes |
|---|
| SF3B1 | Disease-defining in WHO 2022; ≥5% RS in SF3B1+ cases qualify |
| JAK2 V617F | Present in ~50%; contributes to the proliferative/thrombocytosis phenotype |
| CALR | Present in some SF3B1-negative cases |
| TET2, ASXL1 | Co-mutations common |
When SF3B1 is absent, WHO 2022 reclassifies these cases as MDS/MPN-RS-T-NOS (ICC retains MDS/MPN-RS-T-NOS as a separate subtype).
Morphology
- Ring sideroblasts on Prussian blue (iron encircling ≥1/3 of nucleus)
- Megakaryocytes: large with dense/hyperlobated nuclei (MPN-like, similar to ET/PV)
- Dyserythropoiesis prominent
- Dysgranulopoiesis mild or absent
4. Juvenile Myelomonocytic Leukemia (JMML)
(Moved to pediatric/germline-associated category in WHO 2022 and ICC 2022, but historically classified under MDS/MPN)
Clonal disorder of granulocytic and monocytic lineages in children under 6 years (most <3 years); male 2:1.
Diagnostic Criteria
| Feature | Finding |
|---|
| Monocytosis | >1 × 10⁹/L |
| No BCR-ABL1 | Absent |
| RAS/MAPK pathway mutation | Required (PTPN11, KRAS, NRAS, NF1, CBL) |
| Splenomegaly | Present (nearly always) |
| GM-CSF hypersensitivity | In vitro spontaneous CFU-GM formation = confirmatory |
Molecular Features (RAS pathway - one of these required)
| Gene | Frequency | Context |
|---|
| PTPN11 (SHP2) | ~35% | Usually somatic; if germline = Noonan syndrome |
| KRAS | ~20% | |
| NRAS | ~20% | |
| NF1 | ~10% | Neurofibromatosis type 1 (germline) |
| CBL | ~15% | Germline CBL mutations in some |
- Monosomy 7 in ~25%
- Elevated HbF in patients with normal karyotype
- Hypergammaglobulinemia and autoantibodies frequent
5. MDS/MPN, Not Otherwise Specified (MDS/MPN-NOS)
Diagnosed when:
- Clinical, morphologic, and/or laboratory features of both MDS and MPN are present
- Does not meet criteria for CMML, aCML, MDS/MPN-SF3B1-T, or JMML
- No prior MPN or MDS diagnosis that could explain overlap features
- No BCR-ABL1, no PDGFR/FGFR1/JAK2 rearrangements
- Blasts <20%
Molecular profile is heterogeneous (ASXL1, TET2, RUNX1, JAK2, RAS mutations).
Precursor Condition: Clonal Monocytosis of Undetermined Significance (CMUS)
New in ICC 2022: persistent monocytosis (≥0.5 × 10⁹/L, ≥10% WBC differential) with clonal mutation but insufficient for CMML diagnosis (no dysplasia, <10% blasts). Analogous to CHIP/CCUS in the MDS spectrum.
Key Diagnostic Pitfalls
| Pitfall | Resolution |
|---|
| CMML vs reactive monocytosis | Classical monocyte subset by flow (>94% of monocytes are "classical" CD14++CD16- in CMML) |
| CMML vs MDS with monocytosis | Monocyte count threshold: ≥1 × 10⁹/L AND ≥10% |
| aCML vs CML | BCR-ABL1/Ph chromosome absent in aCML |
| aCML vs CMML | Monocytes <10% in aCML; neutrophilia predominates |
| MDS/MPN-SF3B1-T vs ET with RS | SF3B1 mutation, ring sideroblasts, and thrombocytosis together; in pure ET, ring sideroblasts are absent |
| JMML vs CMML in children | Age <14 years; RAS pathway mutation; GM-CSF hypersensitivity |
Summary Table: Molecular Drivers by Entity
| Mutation | CMML | aCML | MDS/MPN-SF3B1-T | JMML | MDS/MPN-NOS |
|---|
| TET2 | +++++ | + | ++ | - | ++ |
| SRSF2 | +++++ | + | + | - | + |
| ASXL1 | +++++ | ++ | ++ | - | ++ |
| SETBP1 | ++ | +++ | - | - | + |
| ETNK1 | - | ++ | - | - | - |
| SF3B1 | + | - | +++++ | - | + |
| JAK2 V617F | + | + | ++++ | - | ++ |
| PTPN11/KRAS/NRAS | ++ (NRAS/KRAS) | + | - | +++++ | + |
| NF1/CBL | - | - | - | +++ | - |
Sources:
- Henry's Clinical Diagnosis and Management by Laboratory Methods, pp. 466-470 (CMML molecular) and pp. 3188-3235 (full MDS/MPN entities)
- Quick Compendium of Clinical Pathology 5th ed., pp. 11485-11527 (CMML, aCML, JMML criteria)
- Fontana et al. 2023, PMC10296742 - WHO/ICC 2022 MDS/MPN focused review
- Gerke et al. 2023, Cancers, PMID 37568631 - MDS/MPN definitions, biology, treatment landscape