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Chapter 131 & 132 — Pneumonia and Lung Abscess

Based on Harrison's Principles of Internal Medicine, 22nd Edition (2025)


CHAPTER 131: PNEUMONIA

Definition

Pneumonia is an infection of the pulmonary parenchyma. Despite its significant morbidity and mortality, it is frequently misdiagnosed, mistreated, and underestimated. Classically, pneumonia is divided into:
CategoryDefinition
Community-Acquired Pneumonia (CAP)Acquired outside hospital or within 48 h of admission
Hospital-Acquired Pneumonia (HAP)Onset ≥48 h after hospital admission, not incubating at admission
Ventilator-Associated Pneumonia (VAP)Onset ≥48 h after endotracheal intubation
Healthcare-Associated PneumoniaDiscontinued - did not reliably predict resistant pathogens; led to overuse of broad-spectrum antibiotics
Aspiration pneumonia accounts for 5-15% of CAP cases. It is best considered a point on the CAP-HAP continuum, involving the airways/parenchyma in patients with macroaspiration risk factors and characteristic anatomic involvement (posterior segments of upper lobes, superior segments of lower lobes).

Pathophysiology

The classic view held that lungs are sterile and pneumonia results from pathogens invading this sterile space. This has been revised.

The Lung Microbiota Model

The lungs harbor a complex, dynamic bacterial community (the lung microbiota). Pneumonia is not simply a "sterile space invaded by a pathogen" - it is an emergent phenomenon driven by:
  1. Microbial entry - via inhalation, microaspiration, or direct mucosal dispersion
  2. Microbial elimination - mucociliary clearance, cough, immune cells
  3. Regional growth conditions - pH, O₂ tension, temperature, nutrient availability

Pathogenic Loop

An inflammatory event causes epithelial/endothelial injury → releases cytokines, chemokines, catecholamines → selectively promotes growth of certain bacteria (e.g., S. pneumoniae, P. aeruginosa) → positive feedback loop → accelerated inflammation + bacterial dominance → full pneumonia syndrome.
Inflammatory mediators:
  • IL-6, TNF → fever
  • IL-8, G-CSF → increased local neutrophil recruitment
  • Macrophage/neutrophil mediators → alveolar damage, altered permeability → hypoxemia, consolidation

Etiology of CAP

PathogenNotes
Streptococcus pneumoniaeMost common overall; causes lobar/segmental pneumonia
Mycoplasma pneumoniaeAtypical; young adults; macrolide resistance increasing
Haemophilus influenzaeCOPD patients; smokers
Legionella pneumophilaWater sources; severe CAP; requires urinary antigen test
Staphylococcus aureusPost-influenza; MRSA possible; cavitary lesions
Chlamydophila pneumoniaeAtypical; mild disease
Respiratory virusesInfluenza A/B, SARS-CoV-2, RSV, adenovirus
Pseudomonas aeruginosaStructural lung disease (bronchiectasis, severe COPD)
Gram-negative bacilli (Enterobacteriaceae)Nursing home patients, recent hospitalization

Site of Care Decision

CURB-65 Score

VariablePoints
C - Confusion (new)1
U - Urea >7 mmol/L (BUN >19 mg/dL)1
R - Respiratory rate ≥30/min1
B - Blood pressure: systolic ≤90 or diastolic ≤60 mmHg1
65 - Age ≥65 years1
Score30-day MortalityRecommendation
01.5%Outpatient
1-2~9%Inpatient (consider outpatient if only age ≥65)
≥3~22%Inpatient; consider ICU

Pneumonia Severity Index (PSI)

Points given for 20 variables (age, comorbidities, abnormal labs/vitals). Assigns to 5 classes:
ClassMortalityDisposition
I0.1%Outpatient
II0.6%Outpatient
III2.8%Outpatient or short observation
IV8.2%Inpatient
V29.2%Inpatient (ICU likely)
PSI is more robustly validated but harder to calculate than CURB-65.

ICU Admission Criteria (ATS/IDSA Major + Minor)

Major criteria (direct ICU):
  • Septic shock requiring vasopressors
  • Acute respiratory failure requiring intubation/mechanical ventilation
Minor criteria (≥3 = ICU or high-level monitoring):
Minor Criteria
Respiratory rate ≥30 breaths/min
PaO₂/FiO₂ ratio ≤250
Multilobar infiltrates
Confusion/disorientation
Uremia (BUN ≥20 mg/dL)
Leukopenia (WBC <4000 cells/μL)
Thrombocytopenia (platelet count <100,000 cells/μL)
Hypothermia (core temp <36°C)
Hypotension requiring aggressive fluid resuscitation

Antibiotic Resistance

S. pneumoniae Resistance Mechanisms

  • Resistance to beta-lactams: direct DNA incorporation and remodeling of penicillin-binding proteins via contact with closely related streptococci
  • Resistance to macrolides: ribosomal methylation (efflux - mef gene; ribosomal mutation - erm gene)
  • When MIC ≥2 μg/mL for penicillin → use high-dose amoxicillin (3 g/day in divided doses) or respiratory fluoroquinolones

CA-MRSA

  • Expresses Panton-Valentine leukocidin (PVL) - necrotizing pneumonia
  • Often follows influenza, presents in young healthy patients
  • Radiograph: rapidly progressing bilateral infiltrates/cavities

Macrolide Resistance in M. pneumoniae

  • Binding-site mutation in domain V of 23S rRNA
  • Rates: Japan (30%), China (95%), France/USA (5-13%)

Treatment of CAP

Algorithm for MRSA/Pseudomonas Risk Assessment

MRSA/Pseudomonas risk assessment algorithm for CAP - nonsevere vs severe, risk vs no risk
FIGURE 131-1 - Algorithm for assessment of inpatient risk of infection with MRSA or P. aeruginosa. Prior respiratory isolation = prior positive respiratory culture. Recent hospitalization AND antibiotics ± local validation = obtain cultures before adding MRSA/pseudomonal coverage.

TABLE 131-4: Outpatient CAP Treatment

Patient StatusRegimenDoses
No comorbidities, no resistance riskAmoxicillin + macrolide or doxycyclineAmoxicillin 1 g TID + Azithromycin 500 mg day 1 then 250 mg/d × 4 days OR Clarithromycin 500 mg BID
Doxycycline monotherapy100 mg BID
Macrolide monotherapy (if local resistance <25%)Azithromycin or clarithromycin as above
With comorbidities ± resistance riskAmoxicillin-clavulanate + macrolide or doxycyclineAmox-clav 500/125 mg TID or 875/125 mg BID + macrolide or doxycycline 100 mg BID
OR cephalosporin + macrolide or doxycyclineCefpodoxime 200 mg BID or Cefuroxime 500 mg BID
Respiratory fluoroquinolone monotherapyLevofloxacin 750 mg/d, Moxifloxacin 400 mg/d, or Gemifloxacin 320 mg/d

TABLE 131-5: Inpatient CAP Treatment

Severity & RiskRegimenDoses
Nonsevere, no risk factorsBeta-lactam + macrolideCeftriaxone 1-2 g/d + Azithromycin 500 mg/d
OR respiratory fluoroquinoloneLevofloxacin 750 mg/d or Moxifloxacin 400 mg/d IV
Nonsevere, prior respiratory isolationAdd MRSA or P. aeruginosa coverage(See below)
Nonsevere, recent hospitalization + antibiotics ± local validationObtain cultures; add MRSA or P. aeruginosa only if cultures positive
Severe, no risk factorsBeta-lactam + macrolide OR Beta-lactam + respiratory FQAs above; escalate dosing
Severe, prior isolation or recent hospitalizationAdd MRSA + P. aeruginosa coverage(See below)
Beta-lactam options: Ampicillin-sulbactam 1.5-3 g IV q6h, Ceftriaxone 1-2 g/d IV, Cefotaxime 1-2 g IV q8h, Ceftaroline 600 mg IV q12h, or Ertapenem 1 g/d IV
MRSA coverage: Vancomycin 15 mg/kg IV q12h (adjust to trough 15-20 mg/L) OR Linezolid 600 mg IV/PO q12h
P. aeruginosa coverage: Piperacillin-tazobactam 4.5 g IV q6h, Cefepime 2 g IV q8h, or Imipenem 500 mg IV q6h

HAP and VAP

Etiology

VAP Pathogens (TABLE 131-6):
Non-MDR Pathogens ("Core Pathogens")MDR Pathogens
S. pneumoniae, H. influenzae, MSSAP. aeruginosa
E. coli, K. pneumoniaeMRSA
Proteus spp., Enterobacter spp.Acinetobacter spp.
Serratia marcescensESBL-positive / carbapenem-resistant Enterobacteriaceae
Legionella pneumophila, Aspergillus spp.

Key Epidemiologic Points

  • VAP develops in 6-52% of mechanically ventilated patients
  • On any given day in ICU: ~10% of patients have pneumonia (vast majority VAP)
  • Highest hazard in first 5 days of ventilation; plateau of ~1% per day after ~2 weeks
  • COVID-19 has reversed the previously declining trend in VAP frequency

Diagnosis

  • In non-intubated HAP: expectorated sputum (confounded by colonization)
  • In VAP/ventilated HAP: bronchoscopic BAL, protected specimen brushing, or mini-BAL from endotracheal tube

TABLE 131-8: Empirical Treatment of HAP/VAP

Risk CategoryBeta-LactamSecond Agent (if MDR risk)Add if MRSA risk
No MDR riskPiperacillin-tazobactam 4.5 g IV q6h--
Cefepime 2 g IV q8h--
Levofloxacin 750 mg IV q24h--
MDR risk (choose 1 from each column)Piperacillin-tazobactam 4.5 g IV q6hAmikacin 15-20 mg/kg IV q24hLinezolid 600 mg IV q12h
Cefepime 2 g IV q8hGentamicin 5-7 mg/kg IV q24hOR Vancomycin (trough 15-20 mg/L)
Ceftazidime 2 g IV q8hTobramycin 5-7 mg/kg IV q24h
Imipenem 500 mg IV q6hCiprofloxacin 400 mg IV q8h
Meropenem 1 g IV q8hLevofloxacin 750 mg IV q24h
Consider newer agents*Colistin (loading 5 mg/kg IV, then 2.5 mg × [1.5 × CrCl + 30] IV q12h)
Polymyxin B 2.5-3.0 mg/kg/day IV in 2 divided doses
Newer agents for resistant organisms:
  • Ceftazidime-avibactam, ceftolozane-tazobactam, imipenem-relebactam, plazomicin → resistant P. aeruginosa
  • Meropenem-vaborbactam, ceftazidime-avibactam → carbapenem-resistant Enterobacteriaceae
  • Cefiderocol → metallo-beta-lactamase Enterobacteriaceae, Stenotrophomonas, Acinetobacter
  • Sulbactam-durlobactam → Acinetobacter spp.

De-escalation, Duration, and Response

  • De-escalation should occur once culture data return and clinical response is documented
  • Duration for CAP: 5 days for most non-severe CAP if afebrile ×48-72 h; up to 7-10 days for more severe disease or specific pathogens (S. aureus, Pseudomonas, Legionella → 14-21 days)
  • Duration for HAP/VAP: 7 days for most patients (shorter is non-inferior to longer in trials)
  • Reassessment at 72 h is mandatory - if not improving, consider: wrong pathogen, wrong antibiotic, complication (effusion/empyema, lung abscess), or non-infectious diagnosis

Prevention

StrategyDetails
Pneumococcal vaccine (PCV15, PCV20, PPSV23)All adults ≥65; immunocompromised at younger ages
Annual influenza vaccineAll adults; especially elderly, healthcare workers
Smoking cessationMajor modifiable risk factor for CAP
VAP bundleHOB elevation 30-45°, daily sedation interruption, oral chlorhexidine, subglottic secretion drainage, early enteral feeding

Global Impact

Pneumonia has a profound global impact though precise data are hard to collect due to variation in:
  • Etiologic pathogens and resistance rates between countries
  • Access to diagnostic facilities and healthcare
  • Vaccine availability and uptake
Simple extrapolation from U.S. data demonstrates substantial effects on quality of life, morbidity, healthcare costs, and mortality across all age groups.


CHAPTER 132: LUNG ABSCESS

Definition

Lung abscess represents necrosis and cavitation of the lung following microbial infection. Usually marked by a single dominant cavity >2 cm in diameter, though multiple abscesses can occur.

Classification

ClassificationDescription
Primary (~80%)Arises from aspiration; mainly anaerobic bacteria; no underlying pulmonary or systemic condition
Secondary (~20%)Arises in setting of underlying condition (obstruction - foreign body, tumor; or systemic - HIV, immunosuppression)
AcuteDuration <4-6 weeks
Chronic (~40%)Duration ≥4-6 weeks

Epidemiology

  • Middle-aged men more commonly affected than women
  • Major risk factor: Aspiration

Risk Factors for Primary Lung Abscess

CategoryExamples
Altered mental statusAlcoholism, drug overdose, seizures, encephalopathy
Neurologic diseaseBulbar dysfunction, prior cerebrovascular events, neuromuscular disease
Esophageal diseaseDysmotility, strictures, tumors
GI riskGastric distension, gastroesophageal reflux, recumbent position
Oral/dentalGingivitis, periodontal disease (anaerobic colonization of gingival crevices)
The risk of aspiration combined with colonization of gingival crevices by anaerobic bacteria/microaerophilic streptococci drives primary lung abscess development. Many physicians consider lung abscess extremely rare in edentulous patients.
Historical note: Incidence fell dramatically in the late 1940s when oral surgical operations stopped being performed in the seated position without cuffed ETT (reducing perioperative aspiration). Penicillin availability further reduced incidence and mortality.

Etiology

TABLE 132-1: Microbial Pathogens Causing Lung Abscess

Clinical ConditionPathogens
Primary lung abscess (aspiration)Anaerobes: Peptostreptococcus spp., Prevotella spp., Bacteroides spp., milleri group streptococci; microaerophilic streptococci
Secondary lung abscess (immunocompromise)S. aureus, gram-negative rods (P. aeruginosa, Enterobacteriaceae), Nocardia spp., Aspergillus spp., Mucorales, Cryptococcus spp., Legionella spp., Rhodococcus equi, P. jirovecii
Embolic lesionsS. aureus (endocarditis), Fusobacterium necrophorum (Lemierre's syndrome)
Endemic infectionsM. tuberculosis, M. avium, M. kansasii, Coccidioides spp., Histoplasma capsulatum, Blastomyces spp., parasites (E. histolytica, Paragonimus westermani, Strongyloides stercoralis)
MiscellaneousBacterial (often S. aureus) after influenza or viral infection, Actinomyces spp.

Pathogenesis

Primary Lung Abscess

  1. Aspiration of anaerobes/microaerophilic streptococci from gingival crevices into lung parenchyma
  2. Initial pneumonitis develops (worsened by gastric acid tissue damage)
  3. Over 7-14 days: parenchymal necrosis and cavitation
  4. Anaerobes produce more extensive tissue necrosis in polymicrobial infections (synergistic virulence factor action)
  5. Dependent lung segments most affected: posterior segment of RUL and apical segments of lower lobes (aspiration in recumbent position); posterior segment of LUL and RML (aspiration in upright position)

Secondary Lung Abscess

  • Post-obstructive: Bronchial obstruction (malignancy, foreign body) prevents secretion clearance → abscess formation
  • Immunosuppressed host: Impaired host defenses (post-BMT, solid organ transplant, HIV) → susceptibility to atypical pathogens

Imaging

Chest Radiograph

  • Thick-walled cavity with air-fluid level (classic finding)
  • Location: dependent segments (posterior upper lobe, superior lower lobe)
  • May take time to distinguish from empyema with bronchopleural fistula

CT Chest (Preferred)

  • Better anatomic definition than plain film
  • May detect abscess earlier than radiograph
  • Distinguishes abscess from empyema, identifies underlying lesion (tumor, obstruction)
  • Guides percutaneous drainage planning
CT scan showing lung abscess development - early infiltrate with central necrosis (A) and cavitation with air-fluid level two weeks later (B)
FIGURE 132-1: Representative chest CT scans showing development of lung abscess. Panel A (left): Left lung infiltrate with central necrosis in a patient with lymphoma-associated severe P. aeruginosa pneumonia (black arrow). Panel B (right): Two weeks later, cavitation with air-fluid levels consistent with lung abscesses (white arrow). [Harrison's 22E, p. 1078]

Clinical Features

Symptoms

SymptomNotes
CoughProductive; often purulent, foul-smelling sputum (anaerobic)
FeverSubacute onset; may be low-grade initially
Pleuritic chest painEspecially if pleural extension
Night sweats, fatigueConstitutional symptoms, often weeks before diagnosis
HemoptysisOccurs; life-threatening if massive
Weight lossProminent in chronic abscesses

Physical Examination

FindingNotes
Decreased breath soundsOver affected area
Dullness to percussionEspecially with associated effusion/empyema
Amphoric breath soundsSometimes heard over large cavities
Oral/dental diseasePeriodontal disease, poor dentition strongly suggestive

Diagnosis

Lung abscesses are documented by chest imaging:
  • Chest radiograph detects thick-walled cavity with air-fluid level
  • CT provides better definition and may provide earlier detection

Microbiologic Workup

  • Blood cultures - obtain before antibiotics
  • Sputum culture - limited by oropharyngeal contamination
  • Bronchoscopy with BAL or protected specimen brushing - more reliable for culture, especially in secondary/immunocompromised cases
  • Thoracentesis - if associated pleural effusion (rule out empyema)
  • Consider Gram stain, aerobic and anaerobic cultures, fungal cultures, AFB smear/culture depending on clinical context
  • Serologies/PCR for endemic fungi, Legionella, as indicated

Key Distinguishing Considerations

FeatureLung AbscessEmpyema with BPFCavitary Malignancy
Wall thicknessThick, irregularThin, smoothIrregular, nodular
Air-fluid levelPresent (round)Present (lenticular)May be present
LocationParenchymalPleural spaceVariable
Associated symptomsFever, putrid sputumFever, pleurisyWeight loss, hemoptysis

Treatment

Antibiotic Therapy (Primary Lung Abscess)

Key point: Clindamycin is superior to penicillin in clinical trials for primary lung abscess because oral anaerobes can produce beta-lactamases.
Metronidazole is NOT effective as monotherapy - covers anaerobes but NOT the microaerophilic streptococci that are frequently part of the mixed flora.
RegimenDoseNotes
Clindamycin (preferred, Option 1)600 mg IV TID → when afebrile: 300 mg PO QIDSwitch to oral once clinical improvement
Beta-lactam/beta-lactamase inhibitor (Option 2)Ampicillin-sulbactam or piperacillin-tazobactam IV → then Amoxicillin-clavulanate 875/125 mg PO BIDIV until stable, then oral step-down
Moxifloxacin (evidence: small study)400 mg/d POComparable to ampicillin-sulbactam

Treatment Duration

  • Continue until imaging shows abscess cleared or regressed to small scar
  • Range: 3-4 weeks to up to 14 weeks
  • Some literature suggests ≥6 weeks associated with better outcomes
  • Secondary abscesses: prolonged course until resolution documented

Secondary Lung Abscess

  • Direct antibiotic coverage at identified pathogen
  • Prolonged courses required (duration until resolution on imaging)
  • Address underlying cause: relieve obstruction, treat systemic condition
  • If presumed primary abscess fails to improve → workup for secondary cause

Interventional/Surgical Management

When to Consider Additional Interventions

  • No response to antibiotics within 7 days (10-20% of patients fail medical therapy)
  • Continued fevers + progressive cavity on imaging
  • Abscess >6-8 cm - less likely to respond to antibiotics alone
ApproachConsiderations
Percutaneous drainageOption when poor surgical candidate; risks: pleural contamination, pneumothorax, hemothorax; traversing normal lung = major complication risk
Surgical resectionDefinitive but reserved for failed medical + failed percutaneous approaches; timing is challenging (balance morbidity risk vs. need to clear persistent infection)
BronchoscopyCan facilitate drainage and obtain better cultures; therapeutic role in postobstructive abscesses

Complications

ComplicationNotes
PneumatocelesPersistent cystic changes post-abscess; correlates with larger cavity size
BronchiectasisPermanent airway damage
EmpyemaExtension to pleural space; requires drainage
Life-threatening hemoptysisMajor vascular erosion
Massive aspiration of abscess contentsCan cause respiratory failure
RecurrenceDespite appropriate therapy

Prognosis

FactorMortality Impact
Primary abscess (overall)~2% mortality
Secondary abscessUp to 75% mortality in some series
Poor prognostic factorsAge >60, malignancy-related, aerobic bacteria, sepsis at presentation, symptoms >8 weeks, abscess size >6 cm

Prevention

StrategyDetails
Airway protectionCuffed endotracheal tube for at-risk surgical/sedated patients
Oral hygieneReduce gingival anaerobic colonization
Minimize sedationDecreases aspiration risk
Head-of-bed elevation30-45° for patients at aspiration risk
Treat underlying conditionsGERD, esophageal disease, neurologic disease

Lemierre's Syndrome (Special Mention)

A distinct form of secondary lung abscess caused by Fusobacterium necrophorum:
  • Begins as peritonsillar/oropharyngeal infection
  • Leads to internal jugular vein thrombophlebitis
  • Septic emboli travel to lungs → multiple bilateral cavitary lesions
  • Treatment: prolonged beta-lactam/metronidazole + anticoagulation (controversial)

Summary Comparison: Pneumonia vs. Lung Abscess

FeaturePneumoniaLung Abscess
PathologyAlveolar exudate/consolidationParenchymal necrosis + cavitation >2 cm
Key pathogensS. pneumoniae, atypicals, virusesAnaerobes, S. aureus, gram-negatives
Risk factorsAge extremes, immunosuppression, comorbiditiesAspiration, poor dentition, alcoholism
Classic imagingConsolidation/infiltrateThick-walled cavity + air-fluid level
Key antibioticBeta-lactam ± macrolide/FQClindamycin or amox-clavulanate
Duration5-14 days3-14 weeks
SurgeryRarely needed10-20% fail medical therapy → drainage/surgery

Sources: Harrison's Principles of Internal Medicine, 22nd Edition (2025), Chapters 131 (Mandell & Niederman) and 132 (Baron, Baron & Barshak), McGraw Hill Medical.
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