carbohydrate chemistry

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Carbohydrate Chemistry

Carbohydrates are the most abundant organic molecules in nature, with the empirical formula (CH₂O)ₙ (n ≥ 3), hence "hydrates of carbon." They serve as energy sources, energy storage polymers, structural materials (cellulose, chitin), and cell-surface recognition molecules.

1. Classification

By Carbon Number

ClassCarbonsAldose ExampleKetose Example
Triose3GlyceraldehydeDihydroxyacetone
Tetrose4ErythroseErythrulose
Pentose5RiboseRibulose
Hexose6Glucose, Galactose, MannoseFructose
Heptose7-Sedoheptulose

By Carbonyl Group

  • Aldoses - have an aldehyde (-CHO) as the carbonyl group (e.g., glucose, galactose)
  • Ketoses - have a keto (C=O) group (e.g., fructose, ribulose)

By Polymer Length

  • Monosaccharides - single sugar units
  • Disaccharides - 2 units (e.g., lactose, sucrose, maltose)
  • Oligosaccharides - 3-10 units (mostly not digested by human enzymes)
  • Polysaccharides - >10 units, can be hundreds of residues (starch, glycogen, cellulose)

2. Structure of Glucose - Three Representations

D-Glucose: straight-chain (A), Haworth projection of α-D-glucopyranose (B), and chair conformation (C)
D-Glucose shown as (A) straight-chain aldehyde form, (B) α-D-glucopyranose (Haworth projection), and (C) chair conformation. - Harper's Illustrated Biochemistry, 32nd Ed.

3. Stereochemistry and Isomerism

D- and L-Isomers (Enantiomers)

  • The designation D or L is based on the orientation of the -OH on the asymmetric carbon farthest from the carbonyl carbon (C-5 in a hexose)
  • D-isomer: -OH on the right in a Fischer projection
  • L-isomer: -OH on the left
  • Virtually all biologically active monosaccharides in humans are D-isomers
  • Most enzymes are stereospecific for either D or L forms; isomerases can interconvert them

Epimers

  • Compounds that differ in configuration around only one carbon (not the carbonyl carbon) are epimers
  • Glucose and galactose are C-4 epimers (differ at C-4 only)
  • Glucose and mannose are C-2 epimers (differ at C-2 only)
Structural relationships among galactose, glucose, mannose, and fructose showing C-2 and C-4 epimer connections
C-2 and C-4 epimers and isomers of glucose. - Lippincott's Biochemistry, 8th Ed.

Optical Activity

  • D/L designation refers to spatial configuration, not direction of light rotation
  • Glucose is dextrorotatory (+), sometimes called "dextrose"
  • Fructose is levorotatory (-), so it is D(-)-fructose
  • Hydrolysis of sucrose yields an "invert sugar" because the strongly levorotatory fructose inverts the dextrorotatory action of sucrose

4. Ring Structures (Cyclization)

Less than 1% of monosaccharides with 5+ carbons exist in the open-chain form in solution. They cyclize spontaneously when the carbonyl group reacts with a hydroxyl group on the same molecule:
  • Pyranose - 6-membered ring (5C + 1O), analogous to pyran; over 99% of glucose in solution
  • Furanose - 5-membered ring (4C + 1O), analogous to furan; common form of fructose and ribose
Pyran and furan ring systems compared to α-D-glucopyranose and α-D-glucofuranose
Pyranose and furanose forms of glucose. - Harper's Illustrated Biochemistry, 32nd Ed.

Anomeric Carbon and Anomers

  • Cyclization makes the former carbonyl carbon asymmetric - this is the anomeric carbon
  • Creates two new diastereomers called α and β anomers:
    • α form: -OH on the anomeric carbon is axial (same side as the ring in a modified Fischer projection; trans to CH₂OH in Haworth)
    • β form: -OH on the anomeric carbon is equatorial (opposite side)
  • For glucose: α form = 36%, β form = 64% at equilibrium

Mutarotation

  • The α and β anomers interconvert spontaneously in solution through the open-chain form
  • This process is called mutarotation
  • Biologically, the anomeric configuration matters: glycogen is built from α-D-glucopyranose; cellulose is built from β-D-glucopyranose
Mutarotation of α and β anomers of D-glucose shown as Fischer projections (A) and Haworth projections (B)
Mutarotation of glucose. - Lippincott's Biochemistry, 8th Ed.

5. Reducing Sugars

  • If the anomeric carbon is free (not involved in a glycosidic bond), the ring can open, exposing the aldehyde group
  • This aldehyde can reduce chromogenic agents like Benedict's reagent (Cu²⁺ is reduced, changing color)
  • All monosaccharides are reducing sugars
  • Among disaccharides: lactose and maltose are reducing (one free anomeric -OH); sucrose is non-reducing (both anomeric carbons are engaged in the glycosidic bond)
  • Fructose (a ketose) is also a reducing sugar because it isomerizes to an aldose
Clinical note: A positive Benedict's test in urine indicates glycosuria, which is not normal and warrants follow-up testing to identify the specific sugar.

6. Glycosidic Bonds

Monosaccharides are joined by glycosidic bonds, formed enzymatically by glycosyltransferases using nucleotide sugars (activated donors, e.g., UDP-glucose) as substrates.
  • Named by the carbons involved and the anomeric configuration: e.g., β(1→4) linkage in lactose (C-1 of β-galactose joined to C-4 of glucose)
  • α(1→4) bonds: found in starch (amylose, amylopectin), glycogen, and maltose
  • α(1→6) bonds: branch points in glycogen and amylopectin
  • β(1→4) bonds: found in cellulose and lactose
  • α(1→2)β bond: sucrose (both anomeric carbons engaged)

N- and O-Glycosidic Bonds to Non-Carbohydrates

  • N-glycosidic bond: sugar links to -NH₂ group (e.g., nucleosides, N-linked glycoproteins)
  • O-glycosidic bond: sugar links to -OH group (e.g., O-linked glycoproteins, steroids)

7. Important Monosaccharide Derivatives

DerivativeStructure/FeatureSignificance
GlucosamineGlucose with -NH₂ at C-2Component of heparin, hyaluronic acid
GalactosamineGalactose with -NH₂ at C-2Component of cartilage (chondroitin sulfate)
N-AcetylglucosamineGlucosamine with N-acetyl groupComponent of glycoproteins, chitin
N-Acetylneuraminic acid (sialic acid)9-carbon amino sugarCell-surface glycoprotein/glycolipid terminal residue
Glucuronic acidGlucose with oxidized C-6 → -COOHDetoxification reactions (UDP-glucuronate), proteoglycans

8. Important Disaccharides

DisaccharideComponentsLinkageReducing?Source
MaltoseGlucose + Glucoseα(1→4)YesStarch hydrolysis, malt
IsomaltoseGlucose + Glucoseα(1→6)YesGlycogen/amylopectin branch hydrolysis
LactoseGalactose + Glucoseβ(1→4)YesMilk
SucroseGlucose + Fructoseα(1→2)βNoSugar cane, sugar beet
TrehaloseGlucose + Glucoseα(1→1)αNoInsect hemolymph, fungi

9. Polysaccharides

Starch (Plant Storage)

  • Amylose (13-20%): linear, unbranched helical chain of glucose with α(1→4) linkages
  • Amylopectin (80-87%): branched; chains of 24-30 glucose residues with α(1→4) in chains and α(1→6) at branch points

Glycogen (Animal Storage - "Animal Starch")

  • More highly branched than amylopectin; chains of 12-15 glucose residues with α(1→4) links and α(1→6) branch points
  • Liver glycogen: maintains blood glucose between meals
  • Muscle glycogen: local fuel for contraction
  • Rapidly mobilized by phosphorylase

Cellulose (Plant Structural)

  • Linear polymer of glucose with β(1→4) linkages
  • Humans cannot digest cellulose (no β(1→4)-glucosidase)
  • Major component of dietary fiber

Inulin

  • Polymer of fructose; found in artichokes, dahlias, chicory
  • Not hydrolyzed by intestinal enzymes; no caloric value
  • Used clinically to measure GFR (glomerular filtration rate)

10. Digestion of Dietary Carbohydrates

StageEnzymeAction
MouthSalivary α-amylaseHydrolyzes random α(1→4) bonds in starch/glycogen → dextrins + oligosaccharides
Stomach-Amylase is inactivated by low pH; digestion pauses
Small intestine (lumen)Pancreatic α-amylaseContinues hydrolysis of starch; produces maltose, maltotriose, limit dextrins
Small intestine (brush border)Maltase: maltose → 2 glucoseFinal monosaccharide release
Lactase (β-galactosidase): lactose → glucose + galactoseDeficiency → lactose intolerance
Sucrase: sucrose → glucose + fructoseDeficiency → osmotic diarrhea
Isomaltase: α(1→6) bonds of dextrins-
  • Final products (glucose, galactose, fructose) are absorbed by enterocytes via specific transporters (SGLT-1 for glucose/galactose, GLUT-5 for fructose)

11. Clinically Relevant Points

  • Lactase deficiency (lactose intolerance): undigested lactose fermented by colonic bacteria → gas, osmotic diarrhea, bloating. Very common (up to 70% of adults globally)
  • Sucrase-isomaltase (SI) deficiency: intolerance to sucrose; affects up to 9% of Americans of European descent; treated with dietary restriction and enzyme replacement
  • Glycosuria (reducing sugar in urine): positive Benedict's test is pathological; requires follow-up for diabetes, galactosemia, or other metabolic disorders
  • Glycemic index: reflects how rapidly a starch raises blood glucose; determined by digestibility and cooking
  • Glycogen storage diseases (e.g., von Gierke, Pompe, McArdle diseases): enzyme defects in glycogen synthesis or breakdown

Sources: Lippincott Illustrated Reviews: Biochemistry 8th Ed., Chapter 7; Harper's Illustrated Biochemistry 32nd Ed., Chapter 15
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