A 24-year-old female presents with 2 days of dysuria, urinary frequency, and urgency. She is afebrile and has no flank pain. Urinalysis shows: Positive leukocyte esterase Negative nitrites 15–20 WBCs/high-power field Which of the following is the most likely causative organism? A. Escherichia coli B. Proteus mirabilis C. Klebsiella pneumoniae D. Staphylococcus saprophyticus E. Pseudomonas aeruginosa

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The answer is D. Staphylococcus saprophyticus, and the textbook sources confirm this clearly. Here is a full breakdown:

Answer: D. Staphylococcus saprophyticus

Why this patient points to S. saprophyticus

ClueSignificance
24-year-old femaleClassic demographic - young, sexually active women aged 16-35
Dysuria, frequency, urgencyLower UTI (cystitis), not upper tract
Afebrile, no flank painUncomplicated UTI - rules out pyelonephritis
Positive leukocyte esteraseConfirms pyuria (infection is real)
Negative nitritesKey discriminator - gram-negative rods (E. coli, Klebsiella, Proteus) reduce nitrates to nitrites; S. saprophyticus does NOT
15-20 WBCs/hpfSignificant pyuria, consistent with bacterial cystitis
The negative nitrite with positive leukocyte esterase in a young woman is the classic exam signal for S. saprophyticus.

Why the other organisms are wrong

  • A. E. coli - Most common overall cause of UTI (~75%), but it IS a gram-negative rod that DOES produce nitrites. The nitrite would be positive.
  • B. Proteus mirabilis - Also gram-negative, produces nitrites, and is more associated with urease activity, struvite stones, and complicated/recurrent UTIs.
  • C. Klebsiella pneumoniae - Gram-negative, produces nitrites, more common in complicated or hospital-acquired UTIs.
  • E. Pseudomonas aeruginosa - Gram-negative, associated with complicated UTIs, catheter-associated infections, and immunocompromised/hospitalized patients. Not a community pathogen in healthy young women.

Textbook confirmation

Per Tintinalli's Emergency Medicine (Table 91-2), the etiologic agents in uncomplicated UTI are:
  1. E. coli (75%)
  2. Staphylococcus saprophyticus (second most common)
  3. Klebsiella pneumoniae
  4. Enterococcus faecalis
Per Jawetz, Melnick & Adelberg's Medical Microbiology: "S. saprophyticus is a relatively common cause of urinary tract infections in young women, although it rarely causes infections in hospitalized patients."
Per Red Book 2021: "Some species of CoNS are associated with urinary tract infection, including Staphylococcus saprophyticus in adolescent females and young adult women, often after sexual intercourse."

Key Facts to Remember for Boards

  • S. saprophyticus is coagulase-negative, novobiocin-resistant (distinguishes it from S. epidermidis, which is novobiocin-sensitive)
  • It is a gram-positive coccus, so it does NOT convert nitrate to nitrite
  • It has a seasonal peak in late summer/fall
  • Treatment: trimethoprim-sulfamethoxazole or nitrofurantoin (same as uncomplicated cystitis)
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