Explain about oncogene and conversion of proto oncogenes to oncogenes in biochemistry

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Oncogenes and Conversion of Proto-Oncogenes to Oncogenes

(Source: Basic Medical Biochemistry - A Clinical Approach, 6e)

1. What is a Proto-Oncogene?

Proto-oncogenes are normal cellular genes that regulate cellular proliferation and differentiation. They encode proteins involved in:
  • Growth factor signaling
  • Signal transduction
  • Transcription factor activity
  • Cell cycle regulation
When a proto-oncogene undergoes a gain-of-function mutation, it becomes an oncogene - a mutated, overactive version that drives uncontrolled cell growth. The term "oncogene" comes from the Greek onkos, meaning "bulk" or "tumor."
"The genes that regulate cellular growth are called proto-oncogenes, and their mutated forms are called oncogenes."
  • Basic Medical Biochemistry, p. 594

2. What is an Oncogene?

An oncogene is a mutated proto-oncogene that produces either:
  • A more active protein (hyperactive/constitutively active), or
  • An increased amount of the normal protein
Either way, the result is that growth-promoting signals are continuously "on," pushing the cell toward uncontrolled proliferation even in the absence of normal activating signals.
The first proof that oncogenes were mutant proto-oncogenes came from studies of human bladder carcinoma, where the ras oncogene sequence differed from the normal c-ras by just a single point mutation - yet this was enough to transform normal cells.

3. Mechanisms of Conversion: Proto-Oncogene → Oncogene

There are four major mechanisms:
Figure 17.3 - Transforming mutations in proto-oncogenes

A. Point Mutations / Chemical & Radiation Carcinogens

Radiation, UV light, and chemical carcinogens (e.g., nitrosamines) cause mutations in DNA in two ways:
  1. Mutation in the coding region - produces a protein with altered amino acid composition that is constitutively active (hyperactive), even without its normal activating signal
  2. Mutation in the promoter/regulatory region - increases the rate of transcription, resulting in overproduction of the normal proto-oncogene protein
Classic example: A single point mutation at codon 12 of ras (glycine → valine) locks the Ras G-protein in its active GTP-bound state permanently, continuously stimulating cell proliferation. This mutation is found in lung, colon, thyroid, pancreatic cancers, and many leukemias.

B. Gene Rearrangement (Translocation or Transposition)

The proto-oncogene (or a portion of it) is moved from its normal chromosomal location to a new position. This can cause:
  1. Strong promoter takeover - the relocated gene comes under control of a stronger, more active promoter, leading to overexpression in inappropriate tissues or at abnormally high levels
  2. Fusion protein formation - a portion of the proto-oncogene fuses with another gene, producing a chimeric protein that is hyperactive or loses its regulatory region
Classic examples:
  • Burkitt lymphoma: The proto-oncogene c-myc (chromosome 8) translocates to chromosome 14, placing it under the control of the immunoglobulin heavy-chain promoter - a very active promoter in B cells. This causes massive overexpression of Myc transcription factor → uncontrolled B-cell proliferation.
  • Chronic Myelogenous Leukemia (CML) - Philadelphia Chromosome: A reciprocal translocation between chromosomes 9 and 22 fuses the Bcr gene (chr 22) with the Abl proto-oncogene (chr 9). The resulting Bcr-Abl fusion protein has lost its regulatory region and is constitutively active as a tyrosine kinase, continuously activating the Ras pathway and driving leukemic cell proliferation. This is the molecular target of the drug imatinib (Gleevec).

C. Gene Amplification

Multiple copies of the proto-oncogene are produced in a single cell. More gene copies = more mRNA = more protein = accelerated cell growth.
Examples:
  • N-myc amplification in some neuroblastomas (associated with poor prognosis)
  • erb-B2 (HER2/neu) amplification in breast, ovarian, lung, and stomach cancers - this is the target of trastuzumab (Herceptin)

D. Viral Insertion

  • Direct oncogene insertion: An oncogenic virus integrates its viral oncogene (v-onc) into the host cell genome
  • Insertional mutagenesis: A virus inserts a strong viral promoter adjacent to a normal cellular proto-oncogene, driving its overexpression (e.g., retroviruses in animal models)

4. Classes of Oncogenes and Associated Tumors

Oncogenes can be classified by the normal function of their protein products:
ClassProto-oncogeneActivation MechanismLocationAssociated Tumor
Growth factorssis (PDGF-β)OverexpressionSecretedGlioma
int-2 (FGF)AmplificationSecretedFibrosarcoma, Breast cancer, Melanoma
Growth factor receptorserb-B1 (EGFR)OverexpressionCell membraneSquamous cell carcinoma (lung)
erb-B2 (HER2)AmplificationCell membraneBreast, ovarian, lung, stomach cancers
PDGFRTranslocationCell membraneChronic myelomonocytic leukemia
SMO (Hedgehog)Point mutationCell membraneBasal cell carcinoma
Signal transduction (G-protein)rasPoint mutationCytoplasmLung, colon, thyroid, pancreas, leukemias
Tyrosine kinasesablTranslocationCytoplasmChronic myeloid leukemia (Philadelphia chr)
srcOverexpressionCytoplasmAcute lymphoblastic leukemia, Colon carcinoma
rafOverexpressionCytoplasmMyeloid leukemia
Serine-threonine kinaseakt2AmplificationCytoplasmOvarian carcinoma
Hormone receptorsRARα (retinoid)TranslocationNucleusAcute promyelocytic leukemia
Transcription factorsMycTranslocationNucleusBurkitt lymphoma

5. The Multistep Nature of Carcinogenesis

A single mutation in a proto-oncogene is not sufficient to cause cancer. Full transformation requires the accumulation of 4 to 7 mutations in genes controlling:
  • Cell proliferation/differentiation (proto-oncogenes)
  • Growth suppression (tumor-suppressor genes like Rb, p53)
  • DNA repair (BRCA1, BRCA2, mismatch repair genes)
  • Apoptosis regulation
The process follows a pattern of clonal expansion: one cell acquires a mutation, proliferates to form a large population, then one cell in that population acquires a second mutation, and so on. Each expansion step increases the probability of acquiring the next transforming mutation.

Key Summary

FeatureProto-oncogeneOncogene
Normal functionPromotes regulated growthDrives uncontrolled growth
Mutation typeNoneGain-of-function
ActivityActive only when signaledConstitutively active
CopiesNormal (2 alleles)Amplified or overexpressed
Dominance-Dominant (one mutant allele suffices)
The dominant nature of oncogenes means that even a single mutated allele can override the normal allele and drive transformation - unlike tumor-suppressor gene mutations, which require loss of both alleles (Knudson's "two-hit" hypothesis).
  • Basic Medical Biochemistry - A Clinical Approach, 6e, pp. 594-597
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